Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
SNED1Q8TER0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.92■■□□□ 1.9
SNED1Q8TER0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SNED1Q8TER0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNED1Q8TER0 TSPY20P-201ENST00000450910 630 ntBASIC26.92■■□□□ 1.9
SNED1Q8TER0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
SNED1Q8TER0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNED1Q8TER0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNED1Q8TER0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNED1Q8TER0 AL121832.2-201ENST00000610979 668 ntBASIC26.91■■□□□ 1.9
SNED1Q8TER0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNED1Q8TER0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNED1Q8TER0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNED1Q8TER0 KRT18P6-201ENST00000555540 1265 ntBASIC26.9■■□□□ 1.9
SNED1Q8TER0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.9■■□□□ 1.9
SNED1Q8TER0 MIR4651-201ENST00000582622 73 ntBASIC26.9■■□□□ 1.9
SNED1Q8TER0 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.9■■□□□ 1.9
SNED1Q8TER0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
SNED1Q8TER0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
SNED1Q8TER0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.9■■□□□ 1.9
SNED1Q8TER0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.89■■□□□ 1.9
SNED1Q8TER0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNED1Q8TER0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNED1Q8TER0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SNED1Q8TER0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.89■■□□□ 1.89
SNED1Q8TER0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.89■■□□□ 1.89
SNED1Q8TER0 AL138781.1-201ENST00000566567 1274 ntBASIC26.89■■□□□ 1.89
SNED1Q8TER0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.89■■□□□ 1.89
SNED1Q8TER0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SNED1Q8TER0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SNED1Q8TER0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SNED1Q8TER0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.88■■□□□ 1.89
SNED1Q8TER0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNED1Q8TER0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
SNED1Q8TER0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNED1Q8TER0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNED1Q8TER0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SNED1Q8TER0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 AC069152.1-201ENST00000438030 544 ntBASIC26.87■■□□□ 1.89
SNED1Q8TER0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 UBE2DNL-204ENST00000602536 740 ntBASIC26.87■■□□□ 1.89
SNED1Q8TER0 AC104187.1-201ENST00000607510 612 ntBASIC26.87■■□□□ 1.89
SNED1Q8TER0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.87■■□□□ 1.89
SNED1Q8TER0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SNED1Q8TER0 KRT87P-202ENST00000534226 1464 ntBASIC26.87■■□□□ 1.89
SNED1Q8TER0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNED1Q8TER0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNED1Q8TER0 OXCT2P1-201ENST00000447263 1535 ntBASIC26.86■■□□□ 1.89
SNED1Q8TER0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.86■■□□□ 1.89
SNED1Q8TER0 AC005224.4-201ENST00000583262 1652 ntBASIC26.86■■□□□ 1.89
SNED1Q8TER0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNED1Q8TER0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.86■■□□□ 1.89
SNED1Q8TER0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNED1Q8TER0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.86■■□□□ 1.89
SNED1Q8TER0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SNED1Q8TER0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNED1Q8TER0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNED1Q8TER0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNED1Q8TER0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.85■■□□□ 1.89
SNED1Q8TER0 AC083906.2-201ENST00000511578 360 ntBASIC26.85■■□□□ 1.89
SNED1Q8TER0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SNED1Q8TER0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNED1Q8TER0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNED1Q8TER0 AC231657.2-201ENST00000624556 255 ntBASIC26.85■■□□□ 1.89
SNED1Q8TER0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.85■■□□□ 1.89
SNED1Q8TER0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SNED1Q8TER0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
SNED1Q8TER0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.85■■□□□ 1.89
SNED1Q8TER0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SNED1Q8TER0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNED1Q8TER0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.84■■□□□ 1.89
SNED1Q8TER0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNED1Q8TER0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC26.84■■□□□ 1.89
SNED1Q8TER0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.84■■□□□ 1.89
SNED1Q8TER0 AC087239.1-201ENST00000622671 572 ntBASIC26.84■■□□□ 1.89
SNED1Q8TER0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNED1Q8TER0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNED1Q8TER0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SNED1Q8TER0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SNED1Q8TER0 AC098934.4-201ENST00000564127 592 ntBASIC26.83■■□□□ 1.89
SNED1Q8TER0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.83■■□□□ 1.89
SNED1Q8TER0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.83■■□□□ 1.89
SNED1Q8TER0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.83■■□□□ 1.89
SNED1Q8TER0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNED1Q8TER0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
SNED1Q8TER0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNED1Q8TER0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.83■■□□□ 1.88
SNED1Q8TER0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.82■■□□□ 1.88
SNED1Q8TER0 CNN2P6-201ENST00000439038 900 ntBASIC26.82■■□□□ 1.88
SNED1Q8TER0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.82■■□□□ 1.88
SNED1Q8TER0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC26.82■■□□□ 1.88
SNED1Q8TER0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNED1Q8TER0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
SNED1Q8TER0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNED1Q8TER0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNED1Q8TER0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SNED1Q8TER0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms