Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRIML1Q8N9V2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 TSPY9P-201ENST00000440215 945 ntBASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 TSPY11P-201ENST00000442607 1045 ntBASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIML1Q8N9V2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
TRIML1Q8N9V2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MIR6724-1-201ENST00000616420 92 ntBASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MIR6724-2-201ENST00000616483 92 ntBASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MIR6724-4-201ENST00000617390 92 ntBASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MIR6724-3-201ENST00000622482 92 ntBASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRIML1Q8N9V2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 AL117332.1-201ENST00000622628 974 ntBASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 AC241377.3-202ENST00000626088 1088 ntBASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 AC241585.3-202ENST00000628937 1088 ntBASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 AC245100.8-202ENST00000629247 1058 ntBASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 FAM99A-202ENST00000538190 1989 ntBASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRIML1Q8N9V2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 AL356441.2-201ENST00000443009 864 ntBASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRIML1Q8N9V2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRIML1Q8N9V2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TRIML1Q8N9V2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 UNC93B8-201ENST00000511903 705 ntBASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 AL031602.1-201ENST00000633169 911 ntBASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 AC019069.1-201ENST00000610008 1333 ntBASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRIML1Q8N9V2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms