Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 AP000240.1-201ENST00000609910 452 ntBASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 AC241377.3-202ENST00000626088 1088 ntBASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 AC241585.3-202ENST00000628937 1088 ntBASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 AC245100.8-202ENST00000629247 1058 ntBASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC00528Q8N1L1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 AC136469.2-201ENST00000623944 1028 ntBASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC00528Q8N1L1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 AC009086.3-201ENST00000623486 1008 ntBASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LINC00528Q8N1L1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 C17orf82-201ENST00000623772 1530 ntBASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 AC137695.1-201ENST00000604126 489 ntBASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00528Q8N1L1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 AC006455.2-201ENST00000429931 906 ntBASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 COA4-204ENST00000541455 1038 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00528Q8N1L1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms