Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 AC104564.3-201ENST00000582367 638 ntBASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.04■■□□□ 1.28
SCN4BQ8IWT1 OXCT2P1-201ENST00000447263 1535 ntBASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SCN4BQ8IWT1 LINC01960-201ENST00000563759 1884 ntBASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 CCDC92B-201ENST00000575506 885 ntBASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
SCN4BQ8IWT1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.02■■□□□ 1.27
SCN4BQ8IWT1 LINC02228-203ENST00000641970 1355 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L2-201ENST00000561772 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L6-201ENST00000626483 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L1-201ENST00000627662 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L8-201ENST00000629013 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L3-201ENST00000630187 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L7-201ENST00000630678 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 DUX4L5-201ENST00000630834 1275 ntBASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SCN4BQ8IWT1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23■■□□□ 1.27
SCN4BQ8IWT1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCN4BQ8IWT1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23■■□□□ 1.27
SCN4BQ8IWT1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCN4BQ8IWT1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCN4BQ8IWT1 SMUG1P1-201ENST00000590640 811 ntBASIC23■■□□□ 1.27
SCN4BQ8IWT1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23■■□□□ 1.27
SCN4BQ8IWT1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SCN4BQ8IWT1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCN4BQ8IWT1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCN4BQ8IWT1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.99■■□□□ 1.27
SCN4BQ8IWT1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
SCN4BQ8IWT1 KRT18P14-201ENST00000534205 1250 ntBASIC22.98■■□□□ 1.27
SCN4BQ8IWT1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.98■■□□□ 1.27
SCN4BQ8IWT1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN4BQ8IWT1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCN4BQ8IWT1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN4BQ8IWT1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCN4BQ8IWT1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCN4BQ8IWT1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.97■■□□□ 1.27
SCN4BQ8IWT1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SCN4BQ8IWT1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms