Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LDB1Q86U70 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LDB1Q86U70 AC137767.1-201ENST00000602918 1920 ntBASIC21.8■■□□□ 1.08
LDB1Q86U70 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.8■■□□□ 1.08
LDB1Q86U70 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LDB1Q86U70 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LDB1Q86U70 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LDB1Q86U70 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDB1Q86U70 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LDB1Q86U70 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LDB1Q86U70 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.79■■□□□ 1.08
LDB1Q86U70 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LDB1Q86U70 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDB1Q86U70 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDB1Q86U70 AC010525.1-201ENST00000585559 441 ntBASIC21.79■■□□□ 1.08
LDB1Q86U70 AC092171.4-201ENST00000609130 632 ntBASIC21.79■■□□□ 1.08
LDB1Q86U70 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDB1Q86U70 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LDB1Q86U70 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDB1Q86U70 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
LDB1Q86U70 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.78■■□□□ 1.08
LDB1Q86U70 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
LDB1Q86U70 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LDB1Q86U70 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDB1Q86U70 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.78■■□□□ 1.08
LDB1Q86U70 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LDB1Q86U70 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.77■■□□□ 1.08
LDB1Q86U70 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
LDB1Q86U70 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.77■■□□□ 1.08
LDB1Q86U70 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.77■■□□□ 1.08
LDB1Q86U70 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDB1Q86U70 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.77■■□□□ 1.07
LDB1Q86U70 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.77■■□□□ 1.07
LDB1Q86U70 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.77■■□□□ 1.07
LDB1Q86U70 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.76■■□□□ 1.07
LDB1Q86U70 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LDB1Q86U70 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.76■■□□□ 1.07
LDB1Q86U70 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.76■■□□□ 1.07
LDB1Q86U70 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.76■■□□□ 1.07
LDB1Q86U70 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
LDB1Q86U70 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LDB1Q86U70 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
LDB1Q86U70 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.75■■□□□ 1.07
LDB1Q86U70 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LDB1Q86U70 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LDB1Q86U70 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LDB1Q86U70 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
LDB1Q86U70 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.74■■□□□ 1.07
LDB1Q86U70 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LDB1Q86U70 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
LDB1Q86U70 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.74■■□□□ 1.07
LDB1Q86U70 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB1Q86U70 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms