Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13BQ7Z7G8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13BQ7Z7G8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VPS13BQ7Z7G8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 UBE2DNL-204ENST00000602536 740 ntBASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 DUX4L16-201ENST00000555130 1264 ntBASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 GCSHP5-201ENST00000443090 522 ntBASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC13.63□□□□□ -0.23
VPS13BQ7Z7G8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 SLC7A5P1-201ENST00000568957 537 ntBASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 AP003733.4-201ENST00000623785 1697 ntBASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 BX005040.4-201ENST00000637145 1518 ntBASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
VPS13BQ7Z7G8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 AL121832.2-201ENST00000610979 668 ntBASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS13BQ7Z7G8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 EED-207ENST00000528180 1745 ntTSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 LINC00543-201ENST00000567234 1845 ntBASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 AC092118.2-201ENST00000613495 667 ntBASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS13BQ7Z7G8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 415.5 ms