Protein–RNA interactions for Protein: Q7Z419

RNF144B, E3 ubiquitin-protein ligase RNF144B, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144BQ7Z419 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF144BQ7Z419 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF144BQ7Z419 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF144BQ7Z419 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF144BQ7Z419 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF144BQ7Z419 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF144BQ7Z419 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.7■□□□□ 0.58
RNF144BQ7Z419 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 CA15P2-201ENST00000611168 834 ntBASIC18.7■□□□□ 0.58
RNF144BQ7Z419 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF144BQ7Z419 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 AC006455.2-201ENST00000429931 906 ntBASIC18.69■□□□□ 0.58
RNF144BQ7Z419 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF144BQ7Z419 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 AL499627.2-201ENST00000606283 725 ntBASIC18.68■□□□□ 0.58
RNF144BQ7Z419 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 MIR6724-1-201ENST00000616420 92 ntBASIC18.68■□□□□ 0.58
RNF144BQ7Z419 MIR6724-2-201ENST00000616483 92 ntBASIC18.68■□□□□ 0.58
RNF144BQ7Z419 MIR6724-4-201ENST00000617390 92 ntBASIC18.68■□□□□ 0.58
RNF144BQ7Z419 MIR6724-3-201ENST00000622482 92 ntBASIC18.68■□□□□ 0.58
RNF144BQ7Z419 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF144BQ7Z419 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.67■□□□□ 0.58
RNF144BQ7Z419 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.67■□□□□ 0.58
RNF144BQ7Z419 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms