Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL031602.1-201ENST00000633169 911 ntBASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NHLRC1Q6VVB1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 DUX4L19-201ENST00000557448 1267 ntBASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NHLRC1Q6VVB1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 LINC01960-201ENST00000563759 1884 ntBASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 ECEL1P1-201ENST00000373592 1742 ntBASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NHLRC1Q6VVB1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NHLRC1Q6VVB1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 SYT6-210ENST00000641643 1587 ntBASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 OR2I1P-207ENST00000453522 948 ntBASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 AC011298.3-201ENST00000615796 283 ntBASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NHLRC1Q6VVB1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 AC139530.1-201ENST00000575312 1977 ntBASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 AC137767.1-201ENST00000602918 1920 ntBASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 AC136469.2-201ENST00000623944 1028 ntBASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.53■□□□□ 0.72
NHLRC1Q6VVB1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 AC242852.2-201ENST00000615738 1807 ntBASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NHLRC1Q6VVB1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms