Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.93■□□□□ 0.94
PDCD4Q53EL6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDCD4Q53EL6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDCD4Q53EL6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDCD4Q53EL6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDCD4Q53EL6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 AC092028.1-203ENST00000608262 953 ntBASIC20.89■□□□□ 0.93
PDCD4Q53EL6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PDCD4Q53EL6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDCD4Q53EL6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDCD4Q53EL6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms