Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 MED7YOL135C 669 nt3.03□□□□□ -1.92
HRD1Q08109 VAM10YOR068C 345 nt3.03□□□□□ -1.92
HRD1Q08109 RET3YPL010W 570 nt3.03□□□□□ -1.92
HRD1Q08109 TCP1YDR212W 1680 nt3.03□□□□□ -1.92
HRD1Q08109 MIH1YMR036C 1665 nt3.03□□□□□ -1.92
HRD1Q08109 SSE2YBR169C 2082 nt3.03□□□□□ -1.92
HRD1Q08109 SSM4YIL030C 3960 nt3.03□□□□□ -1.92
HRD1Q08109 ENA2YDR039C 3276 nt3.02□□□□□ -1.93
HRD1Q08109 ENA1YDR040C 3276 nt3.02□□□□□ -1.93
HRD1Q08109 BMS1YPL217C 3552 nt3.02□□□□□ -1.93
HRD1Q08109 UBC8YEL012W 657 nt3.02□□□□□ -1.93
HRD1Q08109 YAL064W-BYAL064W-B 381 nt3.02□□□□□ -1.93
HRD1Q08109 FLD1YLR404W 858 nt3.02□□□□□ -1.93
HRD1Q08109 ASI2YNL159C 870 nt3.02□□□□□ -1.93
HRD1Q08109 FDH1YOR388C 1131 nt3.02□□□□□ -1.93
HRD1Q08109 YPL168WYPL168W 1293 nt3.02□□□□□ -1.93
HRD1Q08109 CAF130YGR134W 3369 nt3.02□□□□□ -1.93
HRD1Q08109 SET4YJL105W 1683 nt3.01□□□□□ -1.93
HRD1Q08109 FRE4YNR060W 2160 nt3.01□□□□□ -1.93
HRD1Q08109 TMA108YIL137C 2841 nt3.01□□□□□ -1.93
HRD1Q08109 MRPL7YDR237W 879 nt3.01□□□□□ -1.93
HRD1Q08109 YHR173CYHR173C 339 nt3.01□□□□□ -1.93
HRD1Q08109 POG1YIL122W 1056 nt3.01□□□□□ -1.93
HRD1Q08109 DLS1YJL065C 504 nt3.01□□□□□ -1.93
HRD1Q08109 TMA19YKL056C 504 nt3.01□□□□□ -1.93
HRD1Q08109 YOR289WYOR289W 756 nt3.01□□□□□ -1.93
HRD1Q08109 DER1YBR201W 636 nt3.01□□□□□ -1.93
HRD1Q08109 RSC1YGR056W 2787 nt3.01□□□□□ -1.93
HRD1Q08109 MSD1YPL104W 1977 nt3.01□□□□□ -1.93
HRD1Q08109 CPA2YJR109C 3357 nt3.01□□□□□ -1.93
HRD1Q08109 ISW2YOR304W 3363 nt3.01□□□□□ -1.93
HRD1Q08109 RKM3YBR030W 1659 nt3.01□□□□□ -1.93
HRD1Q08109 SLA1YBL007C 3735 nt3.01□□□□□ -1.93
HRD1Q08109 DOA4YDR069C 2781 nt3□□□□□ -1.93
HRD1Q08109 SET1YHR119W 3243 nt3□□□□□ -1.93
HRD1Q08109 YLR049CYLR049C 1287 nt3□□□□□ -1.93
HRD1Q08109 YPR108W-AYPR108W-A 213 nt3□□□□□ -1.93
HRD1Q08109 RCY1YJL204C 2523 nt3□□□□□ -1.93
HRD1Q08109 ASI1YMR119W 1875 nt3□□□□□ -1.93
HRD1Q08109 TAF1YGR274C 3201 nt3□□□□□ -1.93
HRD1Q08109 TYR1YBR166C 1359 nt3□□□□□ -1.93
HRD1Q08109 IMH1YLR309C 2736 nt2.99□□□□□ -1.93
HRD1Q08109 SPO1YNL012W 1896 nt2.99□□□□□ -1.93
HRD1Q08109 MSW1YDR268W 1140 nt2.99□□□□□ -1.93
HRD1Q08109 YGR079WYGR079W 1113 nt2.99□□□□□ -1.93
HRD1Q08109 COX19YLL018C-A 297 nt2.99□□□□□ -1.93
HRD1Q08109 IRC25YLR021W 540 nt2.99□□□□□ -1.93
HRD1Q08109 RIM11YMR139W 1113 nt2.99□□□□□ -1.93
HRD1Q08109 CWC25YNL245C 540 nt2.99□□□□□ -1.93
HRD1Q08109 YNR071CYNR071C 1029 nt2.99□□□□□ -1.93
HRD1Q08109 DSC2YOL073C 969 nt2.99□□□□□ -1.93
HRD1Q08109 NRG2YBR066C 663 nt2.99□□□□□ -1.93
HRD1Q08109 YBR137WYBR137W 540 nt2.99□□□□□ -1.93
HRD1Q08109 COP1YDL145C 3606 nt2.99□□□□□ -1.93
HRD1Q08109 SLM2YNL047C 1971 nt2.99□□□□□ -1.93
HRD1Q08109 RRN6YBL014C 2685 nt2.99□□□□□ -1.93
HRD1Q08109 SPT10YJL127C 1923 nt2.99□□□□□ -1.93
HRD1Q08109 RRP5YMR229C 5190 nt2.98□□□□□ -1.93
HRD1Q08109 YHP1YDR451C 1062 nt2.98□□□□□ -1.93
HRD1Q08109 IES6YEL044W 501 nt2.98□□□□□ -1.93
HRD1Q08109 CDC12YHR107C 1224 nt2.98□□□□□ -1.93
HRD1Q08109 tV(CAC)DtV(CAC)D 73 nt2.98□□□□□ -1.93
HRD1Q08109 tV(CAC)HtV(CAC)H 73 nt2.98□□□□□ -1.93
HRD1Q08109 YBR255C-AYBR255C-A 363 nt2.98□□□□□ -1.93
HRD1Q08109 LTV1YKL143W 1392 nt2.98□□□□□ -1.93
HRD1Q08109 LCB5YLR260W 2064 nt2.97□□□□□ -1.93
HRD1Q08109 ALG11YNL048W 1647 nt2.97□□□□□ -1.93
HRD1Q08109 URC2YDR520C 2319 nt2.97□□□□□ -1.93
HRD1Q08109 GIS4YML006C 2325 nt2.97□□□□□ -1.93
HRD1Q08109 SER3YER081W 1410 nt2.97□□□□□ -1.93
HRD1Q08109 TED1YIL039W 1422 nt2.97□□□□□ -1.93
HRD1Q08109 RPS8BYER102W 603 nt2.97□□□□□ -1.93
HRD1Q08109 COX18YGR062C 951 nt2.97□□□□□ -1.93
HRD1Q08109 RPS8AYBL072C 603 nt2.97□□□□□ -1.93
HRD1Q08109 DDP1YOR163W 567 nt2.97□□□□□ -1.93
HRD1Q08109 YPL073CYPL073C 486 nt2.97□□□□□ -1.93
HRD1Q08109 CTR1YPR124W 1221 nt2.97□□□□□ -1.93
HRD1Q08109 RPS9BYBR189W 588 nt2.97□□□□□ -1.93
HRD1Q08109 AIP1YMR092C 1848 nt2.97□□□□□ -1.93
HRD1Q08109 SIR2YDL042C 1689 nt2.97□□□□□ -1.93
HRD1Q08109 SSL1YLR005W 1386 nt2.97□□□□□ -1.93
HRD1Q08109 YDL242WYDL242W 354 nt2.96□□□□□ -1.94
HRD1Q08109 MOH1YBL049W 417 nt2.96□□□□□ -1.94
HRD1Q08109 YBL065WYBL065W 345 nt2.96□□□□□ -1.94
HRD1Q08109 GPB1YOR371C 2694 nt2.96□□□□□ -1.94
HRD1Q08109 RRN7YJL025W 1545 nt2.96□□□□□ -1.94
HRD1Q08109 YDL180WYDL180W 1644 nt2.96□□□□□ -1.94
HRD1Q08109 UTP25YIL091C 2166 nt2.95□□□□□ -1.94
HRD1Q08109 CTR86YCR054C 1692 nt2.95□□□□□ -1.94
HRD1Q08109 SPS2YDR522C 1509 nt2.95□□□□□ -1.94
HRD1Q08109 ENA5YDR038C 3276 nt2.95□□□□□ -1.94
HRD1Q08109 YDR271CYDR271C 372 nt2.95□□□□□ -1.94
HRD1Q08109 CNN1YFR046C 1086 nt2.95□□□□□ -1.94
HRD1Q08109 SPO74YGL170C 1242 nt2.95□□□□□ -1.94
HRD1Q08109 LST7YGR057C 729 nt2.95□□□□□ -1.94
HRD1Q08109 PSR1YLL010C 1284 nt2.95□□□□□ -1.94
HRD1Q08109 SHH3YMR118C 591 nt2.95□□□□□ -1.94
HRD1Q08109 TIR2YOR010C 756 nt2.95□□□□□ -1.94
HRD1Q08109 YPR077CYPR077C 372 nt2.95□□□□□ -1.94
HRD1Q08109 TDA3YHR009C 1572 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms