Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
EIF4A1P60842 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
EIF4A1P60842 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
EIF4A1P60842 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.15■■■□□ 2.1
EIF4A1P60842 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.15■■■□□ 2.1
EIF4A1P60842 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.15■■■□□ 2.1
EIF4A1P60842 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.15■■■□□ 2.1
EIF4A1P60842 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
EIF4A1P60842 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
EIF4A1P60842 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.14■■■□□ 2.1
EIF4A1P60842 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
EIF4A1P60842 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
EIF4A1P60842 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
EIF4A1P60842 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
EIF4A1P60842 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
EIF4A1P60842 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.13■■■□□ 2.09
EIF4A1P60842 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC28.13■■■□□ 2.09
EIF4A1P60842 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
EIF4A1P60842 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
EIF4A1P60842 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
EIF4A1P60842 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
EIF4A1P60842 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
EIF4A1P60842 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
EIF4A1P60842 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.12■■■□□ 2.09
EIF4A1P60842 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC28.12■■■□□ 2.09
EIF4A1P60842 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
EIF4A1P60842 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
EIF4A1P60842 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
EIF4A1P60842 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.11■■■□□ 2.09
EIF4A1P60842 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.11■■■□□ 2.09
EIF4A1P60842 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
EIF4A1P60842 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
EIF4A1P60842 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC28.11■■■□□ 2.09
EIF4A1P60842 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
EIF4A1P60842 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
EIF4A1P60842 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
EIF4A1P60842 LINC01960-201ENST00000563759 1884 ntBASIC28.1■■■□□ 2.09
EIF4A1P60842 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
EIF4A1P60842 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC28.1■■■□□ 2.09
EIF4A1P60842 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
EIF4A1P60842 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
EIF4A1P60842 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
EIF4A1P60842 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
EIF4A1P60842 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
EIF4A1P60842 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.1■■■□□ 2.09
EIF4A1P60842 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28.1■■■□□ 2.09
EIF4A1P60842 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.09■■■□□ 2.09
EIF4A1P60842 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.09■■■□□ 2.09
EIF4A1P60842 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.09■■■□□ 2.09
EIF4A1P60842 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.09■■■□□ 2.09
EIF4A1P60842 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC28.09■■■□□ 2.09
EIF4A1P60842 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
EIF4A1P60842 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
EIF4A1P60842 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC28.08■■■□□ 2.09
EIF4A1P60842 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.08■■■□□ 2.09
EIF4A1P60842 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.08■■■□□ 2.09
EIF4A1P60842 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.08■■■□□ 2.09
EIF4A1P60842 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
EIF4A1P60842 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
EIF4A1P60842 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
EIF4A1P60842 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 ME3-201ENST00000323418 1068 ntTSL 5 BASIC28.07■■■□□ 2.08
EIF4A1P60842 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC28.07■■■□□ 2.08
EIF4A1P60842 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
EIF4A1P60842 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.07■■■□□ 2.08
EIF4A1P60842 AL137784.2-201ENST00000607332 1000 ntBASIC28.07■■■□□ 2.08
EIF4A1P60842 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 AP004607.4-201ENST00000530158 1459 ntBASIC28.07■■■□□ 2.08
EIF4A1P60842 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
EIF4A1P60842 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.07■■■□□ 2.08
EIF4A1P60842 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC28.07■■■□□ 2.08
EIF4A1P60842 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
EIF4A1P60842 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
EIF4A1P60842 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.06■■■□□ 2.08
EIF4A1P60842 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
EIF4A1P60842 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
EIF4A1P60842 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
EIF4A1P60842 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
EIF4A1P60842 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.06■■■□□ 2.08
EIF4A1P60842 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.06■■■□□ 2.08
EIF4A1P60842 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.06■■■□□ 2.08
EIF4A1P60842 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
EIF4A1P60842 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
EIF4A1P60842 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC28.05■■■□□ 2.08
EIF4A1P60842 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28.05■■■□□ 2.08
EIF4A1P60842 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.05■■■□□ 2.08
EIF4A1P60842 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28.05■■■□□ 2.08
EIF4A1P60842 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
EIF4A1P60842 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
EIF4A1P60842 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.04■■■□□ 2.08
EIF4A1P60842 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms