Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 AIM14YGL160W 1713 nt3.27□□□□□ -1.89
SSU72P53538 SQS1YNL224C 2304 nt3.26□□□□□ -1.89
SSU72P53538 BUD25YER014C-A 462 nt3.26□□□□□ -1.89
SSU72P53538 MOB2YFL034C-B 864 nt3.26□□□□□ -1.89
SSU72P53538 RPS31YLR167W 459 nt3.26□□□□□ -1.89
SSU72P53538 YET2YMR040W 483 nt3.26□□□□□ -1.89
SSU72P53538 SSO2YMR183C 888 nt3.26□□□□□ -1.89
SSU72P53538 YBL081WYBL081W 1107 nt3.26□□□□□ -1.89
SSU72P53538 YOR186WYOR186W 435 nt3.26□□□□□ -1.89
SSU72P53538 TCM62YBR044C 1719 nt3.26□□□□□ -1.89
SSU72P53538 PPZ1YML016C 2079 nt3.26□□□□□ -1.89
SSU72P53538 YBR225WYBR225W 2703 nt3.26□□□□□ -1.89
SSU72P53538 AIP1YMR092C 1848 nt3.26□□□□□ -1.89
SSU72P53538 MPC54YOR177C 1395 nt3.25□□□□□ -1.89
SSU72P53538 URC2YDR520C 2319 nt3.25□□□□□ -1.89
SSU72P53538 APE2YKL157W 2859 nt3.25□□□□□ -1.89
SSU72P53538 YHP1YDR451C 1062 nt3.25□□□□□ -1.89
SSU72P53538 YFL065CYFL065C 309 nt3.25□□□□□ -1.89
SSU72P53538 ERV14YGL054C 417 nt3.25□□□□□ -1.89
SSU72P53538 RPS4BYHR203C 786 nt3.25□□□□□ -1.89
SSU72P53538 RPS4AYJR145C 786 nt3.25□□□□□ -1.89
SSU72P53538 JLP1YLL057C 1239 nt3.25□□□□□ -1.89
SSU72P53538 MUP3YHL036W 1641 nt3.25□□□□□ -1.89
SSU72P53538 CIT1YNR001C 1440 nt3.25□□□□□ -1.89
SSU72P53538 RPB2YOR151C 3675 nt3.24□□□□□ -1.89
SSU72P53538 CNA1YLR433C 1662 nt3.24□□□□□ -1.89
SSU72P53538 KIN2YLR096W 3444 nt3.24□□□□□ -1.89
SSU72P53538 UTP25YIL091C 2166 nt3.24□□□□□ -1.89
SSU72P53538 YER039C-AYER039C-A 219 nt3.24□□□□□ -1.89
SSU72P53538 YER076CYER076C 909 nt3.24□□□□□ -1.89
SSU72P53538 MIC26YGR235C 702 nt3.24□□□□□ -1.89
SSU72P53538 AIR1YIL079C 1083 nt3.24□□□□□ -1.89
SSU72P53538 VTA1YLR181C 993 nt3.24□□□□□ -1.89
SSU72P53538 RPS28BYLR264W 204 nt3.24□□□□□ -1.89
SSU72P53538 YPT7YML001W 627 nt3.24□□□□□ -1.89
SSU72P53538 OST6YML019W 999 nt3.24□□□□□ -1.89
SSU72P53538 TMA16YOR252W 537 nt3.24□□□□□ -1.89
SSU72P53538 SAS4YDR181C 1446 nt3.24□□□□□ -1.89
SSU72P53538 SRP72YPL210C 1923 nt3.24□□□□□ -1.89
SSU72P53538 SWI1YPL016W 3945 nt3.24□□□□□ -1.89
SSU72P53538 TCP1YDR212W 1680 nt3.24□□□□□ -1.89
SSU72P53538 AZR1YGR224W 1842 nt3.23□□□□□ -1.89
SSU72P53538 CWH43YCR017C 2862 nt3.23□□□□□ -1.89
SSU72P53538 ENA5YDR038C 3276 nt3.23□□□□□ -1.89
SSU72P53538 ENA2YDR039C 3276 nt3.23□□□□□ -1.89
SSU72P53538 ENA1YDR040C 3276 nt3.23□□□□□ -1.89
SSU72P53538 ACK1YDL203C 1872 nt3.23□□□□□ -1.89
SSU72P53538 YGR015CYGR015C 987 nt3.23□□□□□ -1.89
SSU72P53538 TIM21YGR033C 720 nt3.23□□□□□ -1.89
SSU72P53538 YGR273CYGR273C 525 nt3.23□□□□□ -1.89
SSU72P53538 REC104YHR157W 549 nt3.23□□□□□ -1.89
SSU72P53538 YKR047WYKR047W 306 nt3.23□□□□□ -1.89
SSU72P53538 TAF4YMR005W 1167 nt3.23□□□□□ -1.89
SSU72P53538 RPL13BYMR142C 600 nt3.23□□□□□ -1.89
SSU72P53538 NRK1YNL129W 723 nt3.23□□□□□ -1.89
SSU72P53538 MFA2YNL145W 117 nt3.23□□□□□ -1.89
SSU72P53538 TRM13YOL125W 1431 nt3.23□□□□□ -1.89
SSU72P53538 RPS7AYOR096W 573 nt3.23□□□□□ -1.89
SSU72P53538 NCR1YPL006W 3513 nt3.23□□□□□ -1.89
SSU72P53538 ANT1YPR128C 987 nt3.23□□□□□ -1.89
SSU72P53538 BAR1YIL015W 1764 nt3.23□□□□□ -1.89
SSU72P53538 TOP1YOL006C 2310 nt3.22□□□□□ -1.89
SSU72P53538 YLR352WYLR352W 2424 nt3.22□□□□□ -1.89
SSU72P53538 NPL4YBR170C 1743 nt3.22□□□□□ -1.89
SSU72P53538 YOR022CYOR022C 2148 nt3.22□□□□□ -1.89
SSU72P53538 FRT2YAL028W 1587 nt3.22□□□□□ -1.89
SSU72P53538 IOC3YFR013W 2364 nt3.22□□□□□ -1.89
SSU72P53538 QRI7YDL104C 1224 nt3.22□□□□□ -1.89
SSU72P53538 PCL9YDL179W 915 nt3.22□□□□□ -1.89
SSU72P53538 PEX10YDR265W 1014 nt3.22□□□□□ -1.89
SSU72P53538 CAF16YFL028C 870 nt3.22□□□□□ -1.89
SSU72P53538 YOR238WYOR238W 912 nt3.22□□□□□ -1.89
SSU72P53538 YPR015CYPR015C 744 nt3.22□□□□□ -1.89
SSU72P53538 SLX1YBR228W 915 nt3.22□□□□□ -1.89
SSU72P53538 MIF2YKL089W 1650 nt3.22□□□□□ -1.89
SSU72P53538 SEC2YNL272C 2280 nt3.22□□□□□ -1.89
SSU72P53538 CPA2YJR109C 3357 nt3.21□□□□□ -1.89
SSU72P53538 TCB3YML072C 4638 nt3.21□□□□□ -1.89
SSU72P53538 TMA108YIL137C 2841 nt3.21□□□□□ -1.9
SSU72P53538 ARO80YDR421W 2853 nt3.21□□□□□ -1.9
SSU72P53538 YER034WYER034W 558 nt3.21□□□□□ -1.9
SSU72P53538 ECO1YFR027W 846 nt3.21□□□□□ -1.9
SSU72P53538 LIF1YGL090W 1266 nt3.21□□□□□ -1.9
SSU72P53538 YGL199CYGL199C 471 nt3.21□□□□□ -1.9
SSU72P53538 PER33YLR064W 822 nt3.21□□□□□ -1.9
SSU72P53538 MRPL3YMR024W 1173 nt3.21□□□□□ -1.9
SSU72P53538 YNL057WYNL057W 333 nt3.21□□□□□ -1.9
SSU72P53538 PSF3YOL146W 585 nt3.21□□□□□ -1.9
SSU72P53538 YOR131CYOR131C 657 nt3.21□□□□□ -1.9
SSU72P53538 SAS5YOR213C 747 nt3.21□□□□□ -1.9
SSU72P53538 SPA2YLL021W 4401 nt3.21□□□□□ -1.9
SSU72P53538 USA1YML029W 2517 nt3.2□□□□□ -1.9
SSU72P53538 MIC60YKR016W 1623 nt3.2□□□□□ -1.9
SSU72P53538 ZDS1YMR273C 2748 nt3.2□□□□□ -1.9
SSU72P53538 snR57snR57 88 nt3.2□□□□□ -1.9
SSU72P53538 FMC1YIL098C 468 nt3.2□□□□□ -1.9
SSU72P53538 ERP1YAR002C-A 660 nt3.2□□□□□ -1.9
SSU72P53538 SIL1YOL031C 1266 nt3.2□□□□□ -1.9
SSU72P53538 AIM41YOR215C 558 nt3.2□□□□□ -1.9
SSU72P53538 PFK26YIL107C 2484 nt3.2□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms