Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 YLL066W-AYLL066W-A 483 nt4.62□□□□□ -1.67
RFX1P48743 YLL067W-AYLL067W-A 483 nt4.62□□□□□ -1.67
RFX1P48743 YLR466C-AYLR466C-A 483 nt4.62□□□□□ -1.67
RFX1P48743 YLR467C-AYLR467C-A 483 nt4.62□□□□□ -1.67
RFX1P48743 TEM1YML064C 738 nt4.62□□□□□ -1.67
RFX1P48743 YML133W-BYML133W-B 483 nt4.62□□□□□ -1.67
RFX1P48743 GPI12YMR281W 915 nt4.62□□□□□ -1.67
RFX1P48743 YNL339W-BYNL339W-B 483 nt4.62□□□□□ -1.67
RFX1P48743 YBL113W-AYBL113W-A 483 nt4.62□□□□□ -1.67
RFX1P48743 RRP36YOR287C 903 nt4.62□□□□□ -1.67
RFX1P48743 YOR314WYOR314W 330 nt4.62□□□□□ -1.67
RFX1P48743 YOR396C-AYOR396C-A 483 nt4.62□□□□□ -1.67
RFX1P48743 YPL283W-BYPL283W-B 483 nt4.62□□□□□ -1.67
RFX1P48743 YPR074W-AYPR074W-A 171 nt4.62□□□□□ -1.67
RFX1P48743 YPR204C-AYPR204C-A 483 nt4.62□□□□□ -1.67
RFX1P48743 RTC1YOL138C 4026 nt4.62□□□□□ -1.67
RFX1P48743 OLE1YGL055W 1533 nt4.62□□□□□ -1.67
RFX1P48743 YBR139WYBR139W 1527 nt4.62□□□□□ -1.67
RFX1P48743 YCL076WYCL076W 744 nt4.61□□□□□ -1.67
RFX1P48743 RAV2YDR202C 1056 nt4.61□□□□□ -1.67
RFX1P48743 FRA2YGL220W 363 nt4.61□□□□□ -1.67
RFX1P48743 PRP18YGR006W 756 nt4.61□□□□□ -1.67
RFX1P48743 GPP1YIL053W 753 nt4.61□□□□□ -1.67
RFX1P48743 AIM19YIL087C 474 nt4.61□□□□□ -1.67
RFX1P48743 UBI4YLL039C 1146 nt4.61□□□□□ -1.67
RFX1P48743 SFH1YLR321C 1281 nt4.61□□□□□ -1.67
RFX1P48743 RPP0YLR340W 939 nt4.61□□□□□ -1.67
RFX1P48743 SME1YOR159C 285 nt4.61□□□□□ -1.67
RFX1P48743 ECM23YPL021W 564 nt4.61□□□□□ -1.67
RFX1P48743 YBR063CYBR063C 1215 nt4.61□□□□□ -1.67
RFX1P48743 UBP8YMR223W 1416 nt4.61□□□□□ -1.67
RFX1P48743 MIG1YGL035C 1515 nt4.61□□□□□ -1.67
RFX1P48743 ALD3YMR169C 1521 nt4.61□□□□□ -1.67
RFX1P48743 ALD2YMR170C 1521 nt4.61□□□□□ -1.67
RFX1P48743 NMD3YHR170W 1557 nt4.61□□□□□ -1.67
RFX1P48743 GAD1YMR250W 1758 nt4.6□□□□□ -1.67
RFX1P48743 IRC22YEL001C 678 nt4.6□□□□□ -1.67
RFX1P48743 YAL047W-AYAL047W-A 330 nt4.6□□□□□ -1.67
RFX1P48743 YMR158C-AYMR158C-A 138 nt4.6□□□□□ -1.67
RFX1P48743 YMR181CYMR181C 465 nt4.6□□□□□ -1.67
RFX1P48743 DUG3YNL191W 1074 nt4.6□□□□□ -1.67
RFX1P48743 YBR053CYBR053C 1077 nt4.6□□□□□ -1.67
RFX1P48743 ARC40YBR234C 1155 nt4.6□□□□□ -1.67
RFX1P48743 RIM21YNL294C 1602 nt4.6□□□□□ -1.67
RFX1P48743 MSC7YHR039C 1935 nt4.6□□□□□ -1.67
RFX1P48743 KIC1YHR102W 3243 nt4.59□□□□□ -1.67
RFX1P48743 YCL068CYCL068C 783 nt4.59□□□□□ -1.67
RFX1P48743 PRM7YDL039C 2097 nt4.59□□□□□ -1.67
RFX1P48743 RPL35BYDL136W 363 nt4.59□□□□□ -1.67
RFX1P48743 SPR6YER115C 576 nt4.59□□□□□ -1.67
RFX1P48743 YER158CYER158C 1722 nt4.59□□□□□ -1.67
RFX1P48743 TIF4632YGL049C 2745 nt4.59□□□□□ -1.67
RFX1P48743 ZPR1YGR211W 1461 nt4.59□□□□□ -1.67
RFX1P48743 TDA3YHR009C 1572 nt4.59□□□□□ -1.67
RFX1P48743 MKS1YNL076W 1755 nt4.59□□□□□ -1.67
RFX1P48743 YNR066CYNR066C 1311 nt4.59□□□□□ -1.67
RFX1P48743 YOR338WYOR338W 1092 nt4.59□□□□□ -1.67
RFX1P48743 YIG1YPL201C 1386 nt4.59□□□□□ -1.67
RFX1P48743 YBR255C-AYBR255C-A 363 nt4.59□□□□□ -1.67
RFX1P48743 PMS1YNL082W 2622 nt4.59□□□□□ -1.68
RFX1P48743 HRK1YOR267C 2280 nt4.58□□□□□ -1.68
RFX1P48743 SAF1YBR280C 1914 nt4.58□□□□□ -1.68
RFX1P48743 SNU23YDL098C 585 nt4.58□□□□□ -1.68
RFX1P48743 YGL193CYGL193C 312 nt4.58□□□□□ -1.68
RFX1P48743 YGL204CYGL204C 306 nt4.58□□□□□ -1.68
RFX1P48743 YGR016WYGR016W 573 nt4.58□□□□□ -1.68
RFX1P48743 PRP38YGR075C 729 nt4.58□□□□□ -1.68
RFX1P48743 NAT2YGR147C 867 nt4.58□□□□□ -1.68
RFX1P48743 YJL028WYJL028W 336 nt4.58□□□□□ -1.68
RFX1P48743 YLR407WYLR407W 687 nt4.58□□□□□ -1.68
RFX1P48743 YMR082CYMR082C 357 nt4.58□□□□□ -1.68
RFX1P48743 RGS2YOR107W 930 nt4.58□□□□□ -1.68
RFX1P48743 ALG11YNL048W 1647 nt4.57□□□□□ -1.68
RFX1P48743 PST1YDR055W 1335 nt4.57□□□□□ -1.68
RFX1P48743 YCR101CYCR101C 549 nt4.57□□□□□ -1.68
RFX1P48743 CNL1YDR357C 369 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)CtK(CUU)C 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)D1tK(CUU)D1 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)D2tK(CUU)D2 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)E1tK(CUU)E1 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)E2tK(CUU)E2 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)FtK(CUU)F 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)G1tK(CUU)G1 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)G2tK(CUU)G2 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)G3tK(CUU)G3 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)ItK(CUU)I 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)JtK(CUU)J 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)KtK(CUU)K 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)MtK(CUU)M 73 nt4.57□□□□□ -1.68
RFX1P48743 tK(CUU)PtK(CUU)P 73 nt4.57□□□□□ -1.68
RFX1P48743 VAR1Q0140 1197 nt4.57□□□□□ -1.68
RFX1P48743 YHL034W-AYHL034W-A 462 nt4.57□□□□□ -1.68
RFX1P48743 COS8YHL048W 1146 nt4.57□□□□□ -1.68
RFX1P48743 IMP2YMR035W 534 nt4.57□□□□□ -1.68
RFX1P48743 YBL059WYBL059W 582 nt4.57□□□□□ -1.68
RFX1P48743 CUS2YNL286W 858 nt4.57□□□□□ -1.68
RFX1P48743 CBP3YPL215W 1008 nt4.57□□□□□ -1.68
RFX1P48743 UTP5YDR398W 1932 nt4.56□□□□□ -1.68
RFX1P48743 RFT1YBL020W 1725 nt4.56□□□□□ -1.68
RFX1P48743 RNA15YGL044C 891 nt4.56□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 67 ms