Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC1A3P43003 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 AC131281.2-201ENST00000520478 145 ntBASIC20.04■□□□□ 0.8
SLC1A3P43003 pRNA.6-201ENST00000610482 90 ntBASIC20.04■□□□□ 0.8
SLC1A3P43003 pRNA.5-201ENST00000612139 90 ntBASIC20.04■□□□□ 0.8
SLC1A3P43003 pRNA.11-201ENST00000618423 90 ntBASIC20.04■□□□□ 0.8
SLC1A3P43003 pRNA.13-201ENST00000619112 90 ntBASIC20.04■□□□□ 0.8
SLC1A3P43003 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC1A3P43003 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC1A3P43003 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A3P43003 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A3P43003 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC1A3P43003 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC1A3P43003 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC1A3P43003 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC1A3P43003 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLC1A3P43003 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SLC1A3P43003 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC1A3P43003 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A3P43003 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.03■□□□□ 0.8
SLC1A3P43003 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC1A3P43003 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC1A3P43003 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SLC1A3P43003 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC1A3P43003 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC1A3P43003 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC1A3P43003 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC1A3P43003 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC1A3P43003 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
SLC1A3P43003 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC1A3P43003 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.02■□□□□ 0.79
SLC1A3P43003 AC087742.1-201ENST00000575880 1738 ntBASIC20.02■□□□□ 0.79
SLC1A3P43003 AC133637.1-201ENST00000624115 1537 ntBASIC20.02■□□□□ 0.79
SLC1A3P43003 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC1A3P43003 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC1A3P43003 LINC01960-201ENST00000563759 1884 ntBASIC20.01■□□□□ 0.79
SLC1A3P43003 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A3P43003 MIR3181-201ENST00000578512 73 ntBASIC20.01■□□□□ 0.79
SLC1A3P43003 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A3P43003 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SLC1A3P43003 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC1A3P43003 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SLC1A3P43003 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLC1A3P43003 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20■□□□□ 0.79
SLC1A3P43003 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 DUX4L19-201ENST00000557448 1267 ntBASIC20■□□□□ 0.79
SLC1A3P43003 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20■□□□□ 0.79
SLC1A3P43003 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
SLC1A3P43003 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SLC1A3P43003 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC1A3P43003 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC1A3P43003 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A3P43003 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A3P43003 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC1A3P43003 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.99■□□□□ 0.79
SLC1A3P43003 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC1A3P43003 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC1A3P43003 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC1A3P43003 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC1A3P43003 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.98■□□□□ 0.79
SLC1A3P43003 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC1A3P43003 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SLC1A3P43003 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms