Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 LINC01960-201ENST00000563759 1884 ntBASIC24.66■■□□□ 1.54
CCT6AP40227 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.66■■□□□ 1.54
CCT6AP40227 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.65■■□□□ 1.54
CCT6AP40227 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCT6AP40227 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCT6AP40227 SLC47A1P1-202ENST00000449666 945 ntBASIC24.65■■□□□ 1.54
CCT6AP40227 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.65■■□□□ 1.54
CCT6AP40227 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCT6AP40227 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCT6AP40227 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CCT6AP40227 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CCT6AP40227 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CCT6AP40227 LINC00565-201ENST00000562710 2331 ntBASIC24.64■■□□□ 1.53
CCT6AP40227 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CCT6AP40227 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCT6AP40227 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCT6AP40227 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.63■■□□□ 1.53
CCT6AP40227 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.63■■□□□ 1.53
CCT6AP40227 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
CCT6AP40227 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCT6AP40227 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCT6AP40227 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCT6AP40227 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.62■■□□□ 1.53
CCT6AP40227 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.62■■□□□ 1.53
CCT6AP40227 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CCT6AP40227 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.62■■□□□ 1.53
CCT6AP40227 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCT6AP40227 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCT6AP40227 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CCT6AP40227 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 AC087742.1-201ENST00000575880 1738 ntBASIC24.61■■□□□ 1.53
CCT6AP40227 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CCT6AP40227 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.61■■□□□ 1.53
CCT6AP40227 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
CCT6AP40227 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
CCT6AP40227 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.61■■□□□ 1.53
CCT6AP40227 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.61■■□□□ 1.53
CCT6AP40227 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CCT6AP40227 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 CLDN5-201ENST00000403084 2357 ntBASIC24.61■■□□□ 1.53
CCT6AP40227 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CCT6AP40227 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.6■■□□□ 1.53
CCT6AP40227 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC24.6■■□□□ 1.53
CCT6AP40227 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.6■■□□□ 1.53
CCT6AP40227 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCT6AP40227 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCT6AP40227 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.59■■□□□ 1.53
CCT6AP40227 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.59■■□□□ 1.53
CCT6AP40227 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCT6AP40227 EDA-201ENST00000338901 1233 ntBASIC24.59■■□□□ 1.53
CCT6AP40227 BX842568.3-201ENST00000418104 571 ntBASIC24.59■■□□□ 1.53
CCT6AP40227 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.59■■□□□ 1.53
CCT6AP40227 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.59■■□□□ 1.53
CCT6AP40227 AL031602.1-201ENST00000633169 911 ntBASIC24.59■■□□□ 1.53
CCT6AP40227 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCT6AP40227 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCT6AP40227 ESRRAP2-201ENST00000418437 1549 ntBASIC24.59■■□□□ 1.53
CCT6AP40227 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.59■■□□□ 1.53
CCT6AP40227 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CCT6AP40227 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
CCT6AP40227 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CCT6AP40227 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.58■■□□□ 1.53
CCT6AP40227 LINC00526-201ENST00000581067 1875 ntBASIC24.58■■□□□ 1.53
CCT6AP40227 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCT6AP40227 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCT6AP40227 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CCT6AP40227 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCT6AP40227 AC008764.7-201ENST00000593779 1081 ntBASIC24.58■■□□□ 1.53
CCT6AP40227 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
CCT6AP40227 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.58■■□□□ 1.52
CCT6AP40227 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CCT6AP40227 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCT6AP40227 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CCT6AP40227 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.57■■□□□ 1.52
CCT6AP40227 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms