Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 PRX1YBL064C 786 nt2.79□□□□□ -1.96
RPB11P38902 ARO80YDR421W 2853 nt2.79□□□□□ -1.96
RPB11P38902 MNR2YKL064W 2910 nt2.79□□□□□ -1.96
RPB11P38902 SIZ1YDR409W 2715 nt2.78□□□□□ -1.96
RPB11P38902 ARO1YDR127W 4767 nt2.78□□□□□ -1.96
RPB11P38902 YRB30YGL164C 1323 nt2.78□□□□□ -1.96
RPB11P38902 CSR2YPR030W 3366 nt2.78□□□□□ -1.96
RPB11P38902 TMA17YDL110C 453 nt2.78□□□□□ -1.96
RPB11P38902 GRE3YHR104W 984 nt2.78□□□□□ -1.96
RPB11P38902 RHO5YNL180C 996 nt2.78□□□□□ -1.96
RPB11P38902 NAT3YPR131C 588 nt2.78□□□□□ -1.96
RPB11P38902 CMD1YBR109C 444 nt2.78□□□□□ -1.96
RPB11P38902 ARG5,6YER069W 2592 nt2.78□□□□□ -1.96
RPB11P38902 ARX1YDR101C 1782 nt2.77□□□□□ -1.97
RPB11P38902 RAD57YDR004W 1383 nt2.77□□□□□ -1.97
RPB11P38902 YDR271CYDR271C 372 nt2.77□□□□□ -1.97
RPB11P38902 tX(XXX)DtX(XXX)D 100 nt2.77□□□□□ -1.97
RPB11P38902 YPR077CYPR077C 372 nt2.77□□□□□ -1.97
RPB11P38902 DIB1YPR082C 432 nt2.77□□□□□ -1.97
RPB11P38902 SET1YHR119W 3243 nt2.77□□□□□ -1.97
RPB11P38902 TMA108YIL137C 2841 nt2.76□□□□□ -1.97
RPB11P38902 PFK26YIL107C 2484 nt2.76□□□□□ -1.97
RPB11P38902 ELC1YPL046C 300 nt2.76□□□□□ -1.97
RPB11P38902 HST1YOL068C 1512 nt2.76□□□□□ -1.97
RPB11P38902 MDM38YOL027C 1722 nt2.76□□□□□ -1.97
RPB11P38902 TGL3YMR313C 1929 nt2.76□□□□□ -1.97
RPB11P38902 TYR1YBR166C 1359 nt2.75□□□□□ -1.97
RPB11P38902 FRT2YAL028W 1587 nt2.75□□□□□ -1.97
RPB11P38902 KTR6YPL053C 1341 nt2.75□□□□□ -1.97
RPB11P38902 STB3YDR169C 1542 nt2.75□□□□□ -1.97
RPB11P38902 YDL242WYDL242W 354 nt2.75□□□□□ -1.97
RPB11P38902 BUD16YEL029C 939 nt2.75□□□□□ -1.97
RPB11P38902 YEL032C-AYEL032C-A 162 nt2.75□□□□□ -1.97
RPB11P38902 YEL053W-AYEL053W-A 348 nt2.75□□□□□ -1.97
RPB11P38902 YGL193CYGL193C 312 nt2.75□□□□□ -1.97
RPB11P38902 LSM1YJL124C 519 nt2.75□□□□□ -1.97
RPB11P38902 RPS28BYLR264W 204 nt2.75□□□□□ -1.97
RPB11P38902 IOC4YMR044W 1428 nt2.75□□□□□ -1.97
RPB11P38902 LCB5YLR260W 2064 nt2.75□□□□□ -1.97
RPB11P38902 DOA4YDR069C 2781 nt2.74□□□□□ -1.97
RPB11P38902 RRN7YJL025W 1545 nt2.74□□□□□ -1.97
RPB11P38902 SPT10YJL127C 1923 nt2.74□□□□□ -1.97
RPB11P38902 YHP1YDR451C 1062 nt2.74□□□□□ -1.97
RPB11P38902 IRC22YEL001C 678 nt2.74□□□□□ -1.97
RPB11P38902 YPT35YHR105W 645 nt2.74□□□□□ -1.97
RPB11P38902 URA4YLR420W 1095 nt2.74□□□□□ -1.97
RPB11P38902 YNR071CYNR071C 1029 nt2.74□□□□□ -1.97
RPB11P38902 MUP3YHL036W 1641 nt2.74□□□□□ -1.97
RPB11P38902 SLM2YNL047C 1971 nt2.74□□□□□ -1.97
RPB11P38902 RPA135YPR010C 3612 nt2.74□□□□□ -1.97
RPB11P38902 CAF130YGR134W 3369 nt2.74□□□□□ -1.97
RPB11P38902 SSE2YBR169C 2082 nt2.73□□□□□ -1.97
RPB11P38902 RSC1YGR056W 2787 nt2.73□□□□□ -1.97
RPB11P38902 ENA2YDR039C 3276 nt2.73□□□□□ -1.97
RPB11P38902 ENA1YDR040C 3276 nt2.73□□□□□ -1.97
RPB11P38902 YDL180WYDL180W 1644 nt2.73□□□□□ -1.97
RPB11P38902 YDR149CYDR149C 708 nt2.73□□□□□ -1.97
RPB11P38902 YGL082WYGL082W 1146 nt2.73□□□□□ -1.97
RPB11P38902 SCM4YGR049W 564 nt2.73□□□□□ -1.97
RPB11P38902 PET54YGR222W 882 nt2.73□□□□□ -1.97
RPB11P38902 RPN1YHR027C 2982 nt2.73□□□□□ -1.97
RPB11P38902 YIL025CYIL025C 375 nt2.73□□□□□ -1.97
RPB11P38902 YAL004WYAL004W 648 nt2.73□□□□□ -1.97
RPB11P38902 VTA1YLR181C 993 nt2.73□□□□□ -1.97
RPB11P38902 YOR008W-BYOR008W-B 102 nt2.73□□□□□ -1.97
RPB11P38902 SUI3YPL237W 858 nt2.73□□□□□ -1.97
RPB11P38902 MAL12YGR292W 1755 nt2.73□□□□□ -1.97
RPB11P38902 MAL32YBR299W 1755 nt2.73□□□□□ -1.97
RPB11P38902 HDA2YDR295C 2025 nt2.73□□□□□ -1.97
RPB11P38902 TOM1YDR457W 9807 nt2.72□□□□□ -1.97
RPB11P38902 SER3YER081W 1410 nt2.72□□□□□ -1.97
RPB11P38902 FUR1YHR128W 651 nt2.72□□□□□ -1.97
RPB11P38902 REE1YJL217W 597 nt2.72□□□□□ -1.97
RPB11P38902 PHD1YKL043W 1101 nt2.72□□□□□ -1.97
RPB11P38902 TMA19YKL056C 504 nt2.72□□□□□ -1.97
RPB11P38902 TPP1YMR156C 717 nt2.72□□□□□ -1.97
RPB11P38902 YNL057WYNL057W 333 nt2.72□□□□□ -1.97
RPB11P38902 CPR8YNR028W 927 nt2.72□□□□□ -1.97
RPB11P38902 YNR042WYNR042W 429 nt2.72□□□□□ -1.97
RPB11P38902 ULP1YPL020C 1866 nt2.72□□□□□ -1.97
RPB11P38902 AIP1YMR092C 1848 nt2.72□□□□□ -1.97
RPB11P38902 SKN7YHR206W 1869 nt2.71□□□□□ -1.98
RPB11P38902 IOC3YFR013W 2364 nt2.71□□□□□ -1.98
RPB11P38902 YDL183CYDL183C 963 nt2.71□□□□□ -1.98
RPB11P38902 DAN1YJR150C 897 nt2.71□□□□□ -1.98
RPB11P38902 PML1YLR016C 615 nt2.71□□□□□ -1.98
RPB11P38902 OST6YML019W 999 nt2.71□□□□□ -1.98
RPB11P38902 YBL065WYBL065W 345 nt2.71□□□□□ -1.98
RPB11P38902 DDP1YOR163W 567 nt2.71□□□□□ -1.98
RPB11P38902 YOR238WYOR238W 912 nt2.71□□□□□ -1.98
RPB11P38902 RIB5YBR256C 717 nt2.71□□□□□ -1.98
RPB11P38902 TCP1YDR212W 1680 nt2.71□□□□□ -1.98
RPB11P38902 NUP60YAR002W 1620 nt2.71□□□□□ -1.98
RPB11P38902 VPS33YLR396C 2076 nt2.7□□□□□ -1.98
RPB11P38902 IGO2YHR132W-A 396 nt2.7□□□□□ -1.98
RPB11P38902 ATG8YBL078C 354 nt2.7□□□□□ -1.98
RPB11P38902 PEP4YPL154C 1218 nt2.7□□□□□ -1.98
RPB11P38902 YBR255C-AYBR255C-A 363 nt2.7□□□□□ -1.98
RPB11P38902 YDR444WYDR444W 2064 nt2.7□□□□□ -1.98
RPB11P38902 DYN1YKR054C 12279 nt2.69□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms