Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 GUSBP5-201ENST00000418136 578 ntBASIC19.56■□□□□ 0.72
SDHAP31040 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.56■□□□□ 0.72
SDHAP31040 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAP31040 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SDHAP31040 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SDHAP31040 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.56■□□□□ 0.72
SDHAP31040 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SDHAP31040 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
SDHAP31040 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.55■□□□□ 0.72
SDHAP31040 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SDHAP31040 AL356740.2-201ENST00000601559 647 ntBASIC19.55■□□□□ 0.72
SDHAP31040 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.55■□□□□ 0.72
SDHAP31040 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SDHAP31040 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
SDHAP31040 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.54■□□□□ 0.72
SDHAP31040 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SDHAP31040 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SDHAP31040 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAP31040 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAP31040 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.53■□□□□ 0.72
SDHAP31040 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAP31040 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.53■□□□□ 0.72
SDHAP31040 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAP31040 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.53■□□□□ 0.72
SDHAP31040 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SDHAP31040 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SDHAP31040 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.52■□□□□ 0.72
SDHAP31040 AC133637.1-201ENST00000624115 1537 ntBASIC19.52■□□□□ 0.72
SDHAP31040 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SDHAP31040 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.52■□□□□ 0.72
SDHAP31040 MIR3621-201ENST00000580529 85 ntBASIC19.52■□□□□ 0.72
SDHAP31040 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.52■□□□□ 0.72
SDHAP31040 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAP31040 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SDHAP31040 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SDHAP31040 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SDHAP31040 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
SDHAP31040 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SDHAP31040 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SDHAP31040 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.51■□□□□ 0.71
SDHAP31040 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.51■□□□□ 0.71
SDHAP31040 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.51■□□□□ 0.71
SDHAP31040 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 FBXW4P1-201ENST00000426721 2239 ntBASIC19.51■□□□□ 0.71
SDHAP31040 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SDHAP31040 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SDHAP31040 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.51■□□□□ 0.71
SDHAP31040 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SDHAP31040 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAP31040 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAP31040 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAP31040 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.5■□□□□ 0.71
SDHAP31040 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAP31040 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAP31040 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAP31040 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SDHAP31040 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SDHAP31040 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAP31040 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.5■□□□□ 0.71
SDHAP31040 AC006455.2-201ENST00000429931 906 ntBASIC19.5■□□□□ 0.71
SDHAP31040 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.5■□□□□ 0.71
SDHAP31040 pRNA.6-201ENST00000610482 90 ntBASIC19.5■□□□□ 0.71
SDHAP31040 pRNA.5-201ENST00000612139 90 ntBASIC19.5■□□□□ 0.71
SDHAP31040 pRNA.11-201ENST00000618423 90 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms