Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
HIST1H1CP16403 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1CP16403 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HIST1H1CP16403 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H1CP16403 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HIST1H1CP16403 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.57■□□□□ 0.72
HIST1H1CP16403 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 AL499627.2-201ENST00000606283 725 ntBASIC19.57■□□□□ 0.72
HIST1H1CP16403 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HIST1H1CP16403 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HIST1H1CP16403 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.56■□□□□ 0.72
HIST1H1CP16403 AL117332.1-201ENST00000622628 974 ntBASIC19.56■□□□□ 0.72
HIST1H1CP16403 AL137060.1-201ENST00000618151 2648 ntBASIC19.56■□□□□ 0.72
HIST1H1CP16403 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HIST1H1CP16403 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.55■□□□□ 0.72
HIST1H1CP16403 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HIST1H1CP16403 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 AC010542.4-201ENST00000563151 1910 ntBASIC19.55■□□□□ 0.72
HIST1H1CP16403 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
HIST1H1CP16403 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST1H1CP16403 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.55■□□□□ 0.72
HIST1H1CP16403 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HIST1H1CP16403 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1CP16403 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1CP16403 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1CP16403 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1CP16403 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HIST1H1CP16403 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.54■□□□□ 0.72
HIST1H1CP16403 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
HIST1H1CP16403 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HIST1H1CP16403 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H1CP16403 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 FAM99A-202ENST00000538190 1989 ntBASIC19.52■□□□□ 0.72
HIST1H1CP16403 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.52■□□□□ 0.72
HIST1H1CP16403 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.52■□□□□ 0.72
HIST1H1CP16403 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HIST1H1CP16403 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.52■□□□□ 0.72
HIST1H1CP16403 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.52■□□□□ 0.72
HIST1H1CP16403 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.52■□□□□ 0.71
HIST1H1CP16403 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HIST1H1CP16403 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.51■□□□□ 0.71
HIST1H1CP16403 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HIST1H1CP16403 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.51■□□□□ 0.71
HIST1H1CP16403 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.51■□□□□ 0.71
HIST1H1CP16403 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HIST1H1CP16403 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms