Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.02■□□□□ 0.96
COX4I1P13073 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COX4I1P13073 THA1P-201ENST00000590384 1145 ntBASIC21.02■□□□□ 0.96
COX4I1P13073 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.02■□□□□ 0.96
COX4I1P13073 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COX4I1P13073 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.02■□□□□ 0.95
COX4I1P13073 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COX4I1P13073 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COX4I1P13073 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.01■□□□□ 0.95
COX4I1P13073 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.01■□□□□ 0.95
COX4I1P13073 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COX4I1P13073 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.01■□□□□ 0.95
COX4I1P13073 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.01■□□□□ 0.95
COX4I1P13073 U85056.1-201ENST00000616429 682 ntBASIC21.01■□□□□ 0.95
COX4I1P13073 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
COX4I1P13073 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
COX4I1P13073 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COX4I1P13073 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21■□□□□ 0.95
COX4I1P13073 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21■□□□□ 0.95
COX4I1P13073 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 KRT18P24-201ENST00000344739 1156 ntBASIC21■□□□□ 0.95
COX4I1P13073 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 ABHD17AP3-201ENST00000503096 1137 ntBASIC21■□□□□ 0.95
COX4I1P13073 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21■□□□□ 0.95
COX4I1P13073 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21■□□□□ 0.95
COX4I1P13073 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21■□□□□ 0.95
COX4I1P13073 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21■□□□□ 0.95
COX4I1P13073 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COX4I1P13073 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COX4I1P13073 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21■□□□□ 0.95
COX4I1P13073 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I1P13073 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
COX4I1P13073 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I1P13073 AC139795.1-202ENST00000500444 432 ntBASIC20.99■□□□□ 0.95
COX4I1P13073 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.99■□□□□ 0.95
COX4I1P13073 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I1P13073 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I1P13073 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I1P13073 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
COX4I1P13073 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.98■□□□□ 0.95
COX4I1P13073 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.98■□□□□ 0.95
COX4I1P13073 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.98■□□□□ 0.95
COX4I1P13073 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.98■□□□□ 0.95
COX4I1P13073 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.98■□□□□ 0.95
COX4I1P13073 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I1P13073 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.97■□□□□ 0.95
COX4I1P13073 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COX4I1P13073 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COX4I1P13073 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I1P13073 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.97■□□□□ 0.95
COX4I1P13073 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 AF106564.1-201ENST00000607058 2553 ntBASIC20.96■□□□□ 0.95
COX4I1P13073 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COX4I1P13073 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
COX4I1P13073 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COX4I1P13073 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
COX4I1P13073 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.96■□□□□ 0.95
COX4I1P13073 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.96■□□□□ 0.95
COX4I1P13073 FEM1AP4-201ENST00000443167 1987 ntBASIC20.96■□□□□ 0.95
COX4I1P13073 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I1P13073 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
COX4I1P13073 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I1P13073 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms