Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LAMP1P11279 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMP1P11279 AC006455.2-201ENST00000429931 906 ntBASIC20.7■□□□□ 0.9
LAMP1P11279 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.7■□□□□ 0.9
LAMP1P11279 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.7■□□□□ 0.9
LAMP1P11279 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMP1P11279 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMP1P11279 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LAMP1P11279 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMP1P11279 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LAMP1P11279 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.69■□□□□ 0.9
LAMP1P11279 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMP1P11279 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LAMP1P11279 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LAMP1P11279 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LAMP1P11279 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LAMP1P11279 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LAMP1P11279 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.68■□□□□ 0.9
LAMP1P11279 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 AL356740.2-201ENST00000601559 647 ntBASIC20.68■□□□□ 0.9
LAMP1P11279 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LAMP1P11279 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
LAMP1P11279 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP1P11279 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 MIR3621-201ENST00000580529 85 ntBASIC20.67■□□□□ 0.9
LAMP1P11279 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.67■□□□□ 0.9
LAMP1P11279 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.67■□□□□ 0.9
LAMP1P11279 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMP1P11279 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP1P11279 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.67■□□□□ 0.9
LAMP1P11279 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP1P11279 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.67■□□□□ 0.9
LAMP1P11279 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LAMP1P11279 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP1P11279 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP1P11279 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LAMP1P11279 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP1P11279 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMP1P11279 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.66■□□□□ 0.9
LAMP1P11279 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.66■□□□□ 0.9
LAMP1P11279 AC099791.2-201ENST00000605725 427 ntBASIC20.66■□□□□ 0.9
LAMP1P11279 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP1P11279 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.66■□□□□ 0.9
LAMP1P11279 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMP1P11279 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.66■□□□□ 0.9
LAMP1P11279 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LAMP1P11279 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LAMP1P11279 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP1P11279 AC133637.1-201ENST00000624115 1537 ntBASIC20.65■□□□□ 0.9
LAMP1P11279 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LAMP1P11279 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMP1P11279 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP1P11279 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP1P11279 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.65■□□□□ 0.9
LAMP1P11279 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMP1P11279 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LAMP1P11279 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.65■□□□□ 0.9
LAMP1P11279 pRNA.6-201ENST00000610482 90 ntBASIC20.65■□□□□ 0.9
LAMP1P11279 pRNA.5-201ENST00000612139 90 ntBASIC20.65■□□□□ 0.9
LAMP1P11279 pRNA.11-201ENST00000618423 90 ntBASIC20.65■□□□□ 0.9
LAMP1P11279 pRNA.13-201ENST00000619112 90 ntBASIC20.65■□□□□ 0.9
LAMP1P11279 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP1P11279 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.65■□□□□ 0.9
LAMP1P11279 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LAMP1P11279 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.64■□□□□ 0.9
LAMP1P11279 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
LAMP1P11279 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LAMP1P11279 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LAMP1P11279 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LAMP1P11279 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.64■□□□□ 0.89
LAMP1P11279 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
LAMP1P11279 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.64■□□□□ 0.89
LAMP1P11279 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.89
LAMP1P11279 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.63■□□□□ 0.89
LAMP1P11279 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LAMP1P11279 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LAMP1P11279 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
LAMP1P11279 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms