Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.85■■□□□ 1.09
SNRPAP09012 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.85■■□□□ 1.09
SNRPAP09012 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNRPAP09012 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.85■■□□□ 1.09
SNRPAP09012 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRPAP09012 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRPAP09012 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SNRPAP09012 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNRPAP09012 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.85■■□□□ 1.09
SNRPAP09012 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.85■■□□□ 1.09
SNRPAP09012 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.84■■□□□ 1.09
SNRPAP09012 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.84■■□□□ 1.09
SNRPAP09012 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.84■■□□□ 1.09
SNRPAP09012 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.84■■□□□ 1.09
SNRPAP09012 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.84■■□□□ 1.09
SNRPAP09012 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNRPAP09012 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SNRPAP09012 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.83■■□□□ 1.09
SNRPAP09012 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SNRPAP09012 BX664725.1-201ENST00000438252 379 ntBASIC21.83■■□□□ 1.09
SNRPAP09012 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNRPAP09012 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SNRPAP09012 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
SNRPAP09012 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SNRPAP09012 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SNRPAP09012 AC009102.2-201ENST00000606772 1639 ntBASIC21.82■■□□□ 1.08
SNRPAP09012 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.82■■□□□ 1.08
SNRPAP09012 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SNRPAP09012 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.82■■□□□ 1.08
SNRPAP09012 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNRPAP09012 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.81■■□□□ 1.08
SNRPAP09012 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
SNRPAP09012 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.81■■□□□ 1.08
SNRPAP09012 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.81■■□□□ 1.08
SNRPAP09012 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNRPAP09012 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SNRPAP09012 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
SNRPAP09012 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SNRPAP09012 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.81■■□□□ 1.08
SNRPAP09012 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.81■■□□□ 1.08
SNRPAP09012 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SNRPAP09012 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.81■■□□□ 1.08
SNRPAP09012 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 AC244015.2-201ENST00000616358 1861 ntBASIC21.8■■□□□ 1.08
SNRPAP09012 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNRPAP09012 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SNRPAP09012 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNRPAP09012 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNRPAP09012 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.79■■□□□ 1.08
SNRPAP09012 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNRPAP09012 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SNRPAP09012 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.79■■□□□ 1.08
SNRPAP09012 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SNRPAP09012 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SNRPAP09012 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNRPAP09012 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.78■■□□□ 1.08
SNRPAP09012 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNRPAP09012 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms