Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.35■□□□□ 0.53
CD74P04233 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CD74P04233 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD74P04233 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
CD74P04233 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.35■□□□□ 0.53
CD74P04233 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD74P04233 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD74P04233 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CD74P04233 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.34■□□□□ 0.53
CD74P04233 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.34■□□□□ 0.53
CD74P04233 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.34■□□□□ 0.53
CD74P04233 MIR4281-201ENST00000580852 62 ntBASIC18.34■□□□□ 0.53
CD74P04233 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.34■□□□□ 0.53
CD74P04233 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CD74P04233 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.34■□□□□ 0.53
CD74P04233 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD74P04233 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.34■□□□□ 0.53
CD74P04233 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.33■□□□□ 0.53
CD74P04233 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.33■□□□□ 0.53
CD74P04233 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD74P04233 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD74P04233 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.33■□□□□ 0.52
CD74P04233 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.33■□□□□ 0.52
CD74P04233 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD74P04233 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.33■□□□□ 0.52
CD74P04233 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.33■□□□□ 0.52
CD74P04233 AC009086.3-201ENST00000623486 1008 ntBASIC18.33■□□□□ 0.52
CD74P04233 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD74P04233 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD74P04233 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.33■□□□□ 0.52
CD74P04233 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD74P04233 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.32■□□□□ 0.52
CD74P04233 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.32■□□□□ 0.52
CD74P04233 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.32■□□□□ 0.52
CD74P04233 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 MIR4449-201ENST00000578365 66 ntBASIC18.32■□□□□ 0.52
CD74P04233 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.32■□□□□ 0.52
CD74P04233 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.32■□□□□ 0.52
CD74P04233 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CD74P04233 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.32■□□□□ 0.52
CD74P04233 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD74P04233 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.31■□□□□ 0.52
CD74P04233 AL157384.1-201ENST00000445995 2473 ntBASIC18.31■□□□□ 0.52
CD74P04233 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD74P04233 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD74P04233 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD74P04233 THA1P-201ENST00000590384 1145 ntBASIC18.31■□□□□ 0.52
CD74P04233 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.31■□□□□ 0.52
CD74P04233 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CD74P04233 AC129492.7-201ENST00000622992 756 ntBASIC18.31■□□□□ 0.52
CD74P04233 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CD74P04233 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD74P04233 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD74P04233 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
CD74P04233 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.31■□□□□ 0.52
CD74P04233 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.3■□□□□ 0.52
CD74P04233 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.3■□□□□ 0.52
CD74P04233 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD74P04233 AF106564.1-201ENST00000607058 2553 ntBASIC18.3■□□□□ 0.52
CD74P04233 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.3■□□□□ 0.52
CD74P04233 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CD74P04233 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD74P04233 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CD74P04233 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.29■□□□□ 0.52
CD74P04233 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.29■□□□□ 0.52
CD74P04233 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD74P04233 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.29■□□□□ 0.52
CD74P04233 KRT18P24-201ENST00000344739 1156 ntBASIC18.29■□□□□ 0.52
CD74P04233 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms