Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 LINC01960-201ENST00000563759 1884 ntBASIC19.54■□□□□ 0.72
HLA-DQA2P01906 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 AC080038.3-201ENST00000623346 1952 ntBASIC19.54■□□□□ 0.72
HLA-DQA2P01906 AC092053.2-201ENST00000640557 1818 ntBASIC19.54■□□□□ 0.72
HLA-DQA2P01906 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 AC004687.1-201ENST00000579003 1625 ntBASIC19.54■□□□□ 0.72
HLA-DQA2P01906 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-DQA2P01906 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-DQA2P01906 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-DQA2P01906 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
HLA-DQA2P01906 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DQA2P01906 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DQA2P01906 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.52■□□□□ 0.71
HLA-DQA2P01906 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-DQA2P01906 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 UNC93B8-201ENST00000511903 705 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 MIR6724-1-201ENST00000616420 92 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 MIR6724-2-201ENST00000616483 92 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 MIR6724-4-201ENST00000617390 92 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 MIR6724-3-201ENST00000622482 92 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-DQA2P01906 C17orf82-201ENST00000623772 1530 ntBASIC19.51■□□□□ 0.71
HLA-DQA2P01906 CLDN5-201ENST00000403084 2357 ntBASIC19.5■□□□□ 0.71
HLA-DQA2P01906 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 AC139530.1-201ENST00000575312 1977 ntBASIC19.5■□□□□ 0.71
HLA-DQA2P01906 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 KRT16P3-201ENST00000439127 1283 ntBASIC19.5■□□□□ 0.71
HLA-DQA2P01906 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-DQA2P01906 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 AL117332.1-201ENST00000622628 974 ntBASIC19.49■□□□□ 0.71
HLA-DQA2P01906 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HLA-DQA2P01906 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DQA2P01906 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms