Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.51■■□□□ 1.51
PGK1P00558 TMEM191A-211ENST00000637163 1067 ntBASIC24.51■■□□□ 1.51
PGK1P00558 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.51■■□□□ 1.51
PGK1P00558 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.51■■□□□ 1.51
PGK1P00558 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PGK1P00558 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.51■■□□□ 1.51
PGK1P00558 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.51■■□□□ 1.51
PGK1P00558 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PGK1P00558 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.5■■□□□ 1.51
PGK1P00558 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PGK1P00558 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.5■■□□□ 1.51
PGK1P00558 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PGK1P00558 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PGK1P00558 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.5■■□□□ 1.51
PGK1P00558 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.5■■□□□ 1.51
PGK1P00558 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.5■■□□□ 1.51
PGK1P00558 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PGK1P00558 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PGK1P00558 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PGK1P00558 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PGK1P00558 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.49■■□□□ 1.51
PGK1P00558 CD99P1-205ENST00000527459 561 ntBASIC24.49■■□□□ 1.51
PGK1P00558 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.49■■□□□ 1.51
PGK1P00558 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.49■■□□□ 1.51
PGK1P00558 AL050303.2-201ENST00000619798 666 ntBASIC24.49■■□□□ 1.51
PGK1P00558 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PGK1P00558 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PGK1P00558 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PGK1P00558 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PGK1P00558 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PGK1P00558 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PGK1P00558 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
PGK1P00558 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PGK1P00558 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.48■■□□□ 1.51
PGK1P00558 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PGK1P00558 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PGK1P00558 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PGK1P00558 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.47■■□□□ 1.51
PGK1P00558 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.47■■□□□ 1.51
PGK1P00558 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.47■■□□□ 1.51
PGK1P00558 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.47■■□□□ 1.51
PGK1P00558 AC104187.1-201ENST00000607510 612 ntBASIC24.47■■□□□ 1.51
PGK1P00558 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PGK1P00558 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PGK1P00558 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PGK1P00558 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.46■■□□□ 1.51
PGK1P00558 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.46■■□□□ 1.51
PGK1P00558 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.46■■□□□ 1.51
PGK1P00558 AC142086.2-201ENST00000569753 217 ntBASIC24.46■■□□□ 1.51
PGK1P00558 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PGK1P00558 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.46■■□□□ 1.51
PGK1P00558 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PGK1P00558 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PGK1P00558 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.46■■□□□ 1.51
PGK1P00558 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PGK1P00558 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.45■■□□□ 1.5
PGK1P00558 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGK1P00558 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PGK1P00558 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGK1P00558 TSPY20P-201ENST00000450910 630 ntBASIC24.45■■□□□ 1.5
PGK1P00558 AC083906.2-201ENST00000511578 360 ntBASIC24.45■■□□□ 1.5
PGK1P00558 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
PGK1P00558 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.5
PGK1P00558 AL121832.2-201ENST00000610979 668 ntBASIC24.45■■□□□ 1.5
PGK1P00558 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGK1P00558 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGK1P00558 AC004812.2-201ENST00000611079 2094 ntBASIC24.44■■□□□ 1.5
PGK1P00558 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PGK1P00558 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGK1P00558 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PGK1P00558 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PGK1P00558 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PGK1P00558 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.44■■□□□ 1.5
PGK1P00558 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.43■■□□□ 1.5
PGK1P00558 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.43■■□□□ 1.5
PGK1P00558 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.43■■□□□ 1.5
PGK1P00558 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
PGK1P00558 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.43■■□□□ 1.5
PGK1P00558 AC005224.4-201ENST00000583262 1652 ntBASIC24.43■■□□□ 1.5
PGK1P00558 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PGK1P00558 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.42■■□□□ 1.5
PGK1P00558 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PGK1P00558 TSPY6P-201ENST00000448518 926 ntBASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms