Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.99■□□□□ 0.95
SNRNP200O75643 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.99■□□□□ 0.95
SNRNP200O75643 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNRNP200O75643 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
SNRNP200O75643 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.98■□□□□ 0.95
SNRNP200O75643 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNRNP200O75643 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNRNP200O75643 AC068587.7-201ENST00000641602 218 ntBASIC20.97■□□□□ 0.95
SNRNP200O75643 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.97■□□□□ 0.95
SNRNP200O75643 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SNRNP200O75643 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SNRNP200O75643 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.96■□□□□ 0.95
SNRNP200O75643 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNRNP200O75643 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNRNP200O75643 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
SNRNP200O75643 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNRNP200O75643 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.96■□□□□ 0.95
SNRNP200O75643 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SNRNP200O75643 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.96■□□□□ 0.95
SNRNP200O75643 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.96■□□□□ 0.95
SNRNP200O75643 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNRNP200O75643 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
SNRNP200O75643 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 AC133561.1-201ENST00000568600 2415 ntBASIC20.95■□□□□ 0.94
SNRNP200O75643 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.95■□□□□ 0.94
SNRNP200O75643 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 TPRG1LP1-201ENST00000598702 760 ntBASIC20.95■□□□□ 0.94
SNRNP200O75643 AL358852.1-201ENST00000623174 1268 ntBASIC20.95■□□□□ 0.94
SNRNP200O75643 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.95■□□□□ 0.94
SNRNP200O75643 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.95■□□□□ 0.94
SNRNP200O75643 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.95■□□□□ 0.94
SNRNP200O75643 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.95■□□□□ 0.94
SNRNP200O75643 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNRNP200O75643 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.94■□□□□ 0.94
SNRNP200O75643 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNRNP200O75643 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.94■□□□□ 0.94
SNRNP200O75643 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.94■□□□□ 0.94
SNRNP200O75643 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNRNP200O75643 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNRNP200O75643 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNRNP200O75643 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SNRNP200O75643 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SNRNP200O75643 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNRNP200O75643 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNRNP200O75643 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNRNP200O75643 LINC00526-201ENST00000581067 1875 ntBASIC20.93■□□□□ 0.94
SNRNP200O75643 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNRNP200O75643 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SNRNP200O75643 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SNRNP200O75643 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SNRNP200O75643 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SNRNP200O75643 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNRNP200O75643 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNRNP200O75643 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNRNP200O75643 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNRNP200O75643 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNRNP200O75643 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.92■□□□□ 0.94
SNRNP200O75643 AC097381.1-201ENST00000429019 1296 ntBASIC20.92■□□□□ 0.94
SNRNP200O75643 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.92■□□□□ 0.94
SNRNP200O75643 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.92■□□□□ 0.94
SNRNP200O75643 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNRNP200O75643 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNRNP200O75643 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNRNP200O75643 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNRNP200O75643 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNRNP200O75643 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.92■□□□□ 0.94
SNRNP200O75643 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNRNP200O75643 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.92■□□□□ 0.94
SNRNP200O75643 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SNRNP200O75643 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SNRNP200O75643 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNRNP200O75643 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
SNRNP200O75643 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 KRT18P14-201ENST00000534205 1250 ntBASIC20.91■□□□□ 0.94
SNRNP200O75643 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.91■□□□□ 0.94
SNRNP200O75643 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNRNP200O75643 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms