Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD6O75340 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD6O75340 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD6O75340 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDCD6O75340 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDCD6O75340 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDCD6O75340 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 TSPY9P-201ENST00000440215 945 ntBASIC18.41■□□□□ 0.54
PDCD6O75340 TSPY11P-201ENST00000442607 1045 ntBASIC18.41■□□□□ 0.54
PDCD6O75340 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD6O75340 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD6O75340 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.41■□□□□ 0.54
PDCD6O75340 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDCD6O75340 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PDCD6O75340 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDCD6O75340 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD6O75340 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDCD6O75340 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD6O75340 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD6O75340 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD6O75340 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD6O75340 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDCD6O75340 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.4■□□□□ 0.54
PDCD6O75340 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDCD6O75340 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDCD6O75340 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
PDCD6O75340 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDCD6O75340 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.39■□□□□ 0.53
PDCD6O75340 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
PDCD6O75340 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD6O75340 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD6O75340 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDCD6O75340 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
PDCD6O75340 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.39■□□□□ 0.53
PDCD6O75340 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PDCD6O75340 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD6O75340 AL499627.2-201ENST00000606283 725 ntBASIC18.39■□□□□ 0.53
PDCD6O75340 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PDCD6O75340 AC010542.4-201ENST00000563151 1910 ntBASIC18.39■□□□□ 0.53
PDCD6O75340 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDCD6O75340 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
PDCD6O75340 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD6O75340 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 RARRES2P1-201ENST00000474487 481 ntBASIC18.38■□□□□ 0.53
PDCD6O75340 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD6O75340 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDCD6O75340 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.38■□□□□ 0.53
PDCD6O75340 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.37■□□□□ 0.53
PDCD6O75340 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDCD6O75340 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDCD6O75340 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD6O75340 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.37■□□□□ 0.53
PDCD6O75340 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDCD6O75340 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PDCD6O75340 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.37■□□□□ 0.53
PDCD6O75340 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 AC009299.2-201ENST00000482477 511 ntBASIC18.36■□□□□ 0.53
PDCD6O75340 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.36■□□□□ 0.53
PDCD6O75340 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDCD6O75340 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDCD6O75340 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD6O75340 FAM99A-202ENST00000538190 1989 ntBASIC18.35■□□□□ 0.53
PDCD6O75340 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms