Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN4O14493 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.55■□□□□ 0.88
CLDN4O14493 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN4O14493 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CLDN4O14493 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN4O14493 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN4O14493 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN4O14493 ESRRAP2-201ENST00000418437 1549 ntBASIC20.54■□□□□ 0.88
CLDN4O14493 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN4O14493 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
CLDN4O14493 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN4O14493 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.54■□□□□ 0.88
CLDN4O14493 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN4O14493 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN4O14493 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 TSPY26P-201ENST00000476365 1326 ntBASIC20.53■□□□□ 0.88
CLDN4O14493 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CLDN4O14493 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN4O14493 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 AC105265.2-201ENST00000467189 838 ntBASIC20.53■□□□□ 0.88
CLDN4O14493 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CLDN4O14493 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN4O14493 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CLDN4O14493 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN4O14493 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN4O14493 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN4O14493 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CLDN4O14493 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN4O14493 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN4O14493 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN4O14493 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN4O14493 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN4O14493 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN4O14493 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN4O14493 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN4O14493 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CLDN4O14493 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN4O14493 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN4O14493 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLDN4O14493 C1orf229-201ENST00000623686 2258 ntBASIC20.51■□□□□ 0.87
CLDN4O14493 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN4O14493 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLDN4O14493 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLDN4O14493 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 OXCT2P1-201ENST00000447263 1535 ntBASIC20.5■□□□□ 0.87
CLDN4O14493 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN4O14493 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN4O14493 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.5■□□□□ 0.87
CLDN4O14493 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN4O14493 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLDN4O14493 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN4O14493 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN4O14493 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.49■□□□□ 0.87
CLDN4O14493 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.49■□□□□ 0.87
CLDN4O14493 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLDN4O14493 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLDN4O14493 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLDN4O14493 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN4O14493 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 AC087742.1-201ENST00000575880 1738 ntBASIC20.48■□□□□ 0.87
CLDN4O14493 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.48■□□□□ 0.87
CLDN4O14493 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.48■□□□□ 0.87
CLDN4O14493 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN4O14493 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.48■□□□□ 0.87
CLDN4O14493 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.48■□□□□ 0.87
CLDN4O14493 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLDN4O14493 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CLDN4O14493 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms