Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H3BM21 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H3BM21 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
H3BM21 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.72■■□□□ 1.07
H3BM21 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
H3BM21 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
H3BM21 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.71■■□□□ 1.07
H3BM21 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
H3BM21 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.71■■□□□ 1.07
H3BM21 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.71■■□□□ 1.07
H3BM21 KRT18P5-201ENST00000436075 1291 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L2-201ENST00000561772 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.71■■□□□ 1.07
H3BM21 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.71■■□□□ 1.07
H3BM21 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
H3BM21 DUX4L6-201ENST00000626483 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L1-201ENST00000627662 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L8-201ENST00000629013 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L3-201ENST00000630187 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L7-201ENST00000630678 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 DUX4L5-201ENST00000630834 1275 ntBASIC21.71■■□□□ 1.07
H3BM21 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H3BM21 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3BM21 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
H3BM21 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3BM21 LINC02228-203ENST00000641970 1355 ntBASIC21.71■■□□□ 1.07
H3BM21 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
H3BM21 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
H3BM21 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3BM21 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.71■■□□□ 1.07
H3BM21 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3BM21 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.7■■□□□ 1.06
H3BM21 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
H3BM21 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.7■■□□□ 1.06
H3BM21 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.7■■□□□ 1.06
H3BM21 AC105233.4-201ENST00000642045 216 ntBASIC21.7■■□□□ 1.06
H3BM21 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3BM21 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
H3BM21 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3BM21 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
H3BM21 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
H3BM21 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.69■■□□□ 1.06
H3BM21 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
H3BM21 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
H3BM21 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
H3BM21 AL137784.2-201ENST00000607332 1000 ntBASIC21.69■■□□□ 1.06
H3BM21 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
H3BM21 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.69■■□□□ 1.06
H3BM21 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
H3BM21 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
H3BM21 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3BM21 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.68■■□□□ 1.06
H3BM21 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
H3BM21 CCDC92B-201ENST00000575506 885 ntBASIC21.68■■□□□ 1.06
H3BM21 AC068587.7-201ENST00000641602 218 ntBASIC21.68■■□□□ 1.06
H3BM21 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3BM21 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
H3BM21 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
H3BM21 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.67■■□□□ 1.06
H3BM21 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 AC004687.1-201ENST00000579003 1625 ntBASIC21.67■■□□□ 1.06
H3BM21 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.67■■□□□ 1.06
H3BM21 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.67■■□□□ 1.06
H3BM21 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.67■■□□□ 1.06
H3BM21 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.67■■□□□ 1.06
H3BM21 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3BM21 AC022517.1-201ENST00000592429 346 ntBASIC21.67■■□□□ 1.06
H3BM21 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
H3BM21 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3BM21 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
H3BM21 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.66■■□□□ 1.06
H3BM21 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
H3BM21 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
H3BM21 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
H3BM21 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.66■■□□□ 1.06
H3BM21 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
H3BM21 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3BM21 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.66■■□□□ 1.06
H3BM21 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.66■■□□□ 1.06
H3BM21 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.66■■□□□ 1.06
H3BM21 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.66■■□□□ 1.06
H3BM21 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
H3BM21 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.66■■□□□ 1.06
H3BM21 KRT18P14-201ENST00000534205 1250 ntBASIC21.66■■□□□ 1.06
H3BM21 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.66■■□□□ 1.06
H3BM21 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.66■■□□□ 1.06
H3BM21 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms