Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH3D21A4FU49 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3D21A4FU49 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.19■□□□□ 0.82
SH3D21A4FU49 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH3D21A4FU49 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.19■□□□□ 0.82
SH3D21A4FU49 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH3D21A4FU49 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.19■□□□□ 0.82
SH3D21A4FU49 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SH3D21A4FU49 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 AC004448.1-201ENST00000458332 883 ntBASIC20.18■□□□□ 0.82
SH3D21A4FU49 PBX2P1-201ENST00000493219 1291 ntBASIC20.18■□□□□ 0.82
SH3D21A4FU49 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH3D21A4FU49 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SH3D21A4FU49 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.17■□□□□ 0.82
SH3D21A4FU49 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SH3D21A4FU49 SRD5A1P1-201ENST00000442297 786 ntBASIC20.17■□□□□ 0.82
SH3D21A4FU49 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.17■□□□□ 0.82
SH3D21A4FU49 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SH3D21A4FU49 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH3D21A4FU49 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.17■□□□□ 0.82
SH3D21A4FU49 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3D21A4FU49 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.16■□□□□ 0.82
SH3D21A4FU49 AC106739.1-201ENST00000617035 715 ntBASIC20.16■□□□□ 0.82
SH3D21A4FU49 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SH3D21A4FU49 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH3D21A4FU49 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SH3D21A4FU49 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.15■□□□□ 0.82
SH3D21A4FU49 FBXW4P1-201ENST00000426721 2239 ntBASIC20.15■□□□□ 0.82
SH3D21A4FU49 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SH3D21A4FU49 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SH3D21A4FU49 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SH3D21A4FU49 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SH3D21A4FU49 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SH3D21A4FU49 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SH3D21A4FU49 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SH3D21A4FU49 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SH3D21A4FU49 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SH3D21A4FU49 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3D21A4FU49 AC005703.6-201ENST00000623265 1329 ntBASIC20.13■□□□□ 0.81
SH3D21A4FU49 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.13■□□□□ 0.81
SH3D21A4FU49 UNC93B3-201ENST00000308076 687 ntBASIC20.13■□□□□ 0.81
SH3D21A4FU49 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SH3D21A4FU49 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms