Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 LINC01960-201ENST00000563759 1884 ntBASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 AL117332.1-201ENST00000622628 974 ntBASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 AL035685.1-201ENST00000636663 812 ntBASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV12-3A0A0B4J271 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV12-3A0A0B4J271 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 AC092053.2-201ENST00000640557 1818 ntBASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 AC139530.1-201ENST00000575312 1977 ntBASIC16.17■□□□□ 0.18
TRAV12-3A0A0B4J271 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 AC138932.1-201ENST00000534164 6830 ntBASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV12-3A0A0B4J271 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-3A0A0B4J271 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms