Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IGHV3-43A0A0B4J1X8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 pRNA.6-201ENST00000610482 90 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 pRNA.5-201ENST00000612139 90 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 pRNA.11-201ENST00000618423 90 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 pRNA.13-201ENST00000619112 90 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 AC241377.3-202ENST00000626088 1088 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 AC241585.3-202ENST00000628937 1088 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 AC245100.8-202ENST00000629247 1058 ntBASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IGHV3-43A0A0B4J1X8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IGHV3-43A0A0B4J1X8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.08■□□□□ 0.48
IGHV3-43A0A0B4J1X8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AC092053.2-201ENST00000640557 1818 ntBASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AL499627.2-201ENST00000606283 725 ntBASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.07■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SRD5A1P1-201ENST00000442297 786 ntBASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AL512631.2-201ENST00000604634 923 ntBASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
IGHV3-43A0A0B4J1X8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AC133637.1-201ENST00000624115 1537 ntBASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.05■□□□□ 0.48
IGHV3-43A0A0B4J1X8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms