Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRAV19A0A0A6YYK7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 AC004911.1-201ENST00000416316 871 ntBASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.68■■□□□ 1.22
TRAV19A0A0A6YYK7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 AC090192.1-201ENST00000517740 490 ntBASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRAV19A0A0A6YYK7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TRAV19A0A0A6YYK7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TRAV19A0A0A6YYK7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.64■■□□□ 1.22
TRAV19A0A0A6YYK7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
TRAV19A0A0A6YYK7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.64■■□□□ 1.21
TRAV19A0A0A6YYK7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.64■■□□□ 1.21
TRAV19A0A0A6YYK7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.64■■□□□ 1.21
TRAV19A0A0A6YYK7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TRAV19A0A0A6YYK7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TRAV19A0A0A6YYK7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TRAV19A0A0A6YYK7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 KRT18P61-201ENST00000585825 1298 ntBASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TRAV19A0A0A6YYK7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TRAV19A0A0A6YYK7 AP004607.4-201ENST00000530158 1459 ntBASIC22.6■■□□□ 1.21
TRAV19A0A0A6YYK7 AC004854.2-201ENST00000608450 1441 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms