Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 KRT16P3-201ENST00000439127 1283 ntBASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC25A24-204ENST00000569674 2357 ntBASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 AC005703.6-201ENST00000623265 1329 ntBASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ALDH1A3-203ENST00000557963 1670 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ESRRAP2-201ENST00000418437 1549 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 UNC93B8-201ENST00000511903 705 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MIR6724-1-201ENST00000616420 92 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MIR6724-2-201ENST00000616483 92 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MIR6724-4-201ENST00000617390 92 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MIR6724-3-201ENST00000622482 92 ntBASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms