Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 DUX4L1-201ENST00000627662 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L8-201ENST00000629013 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L3-201ENST00000630187 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L7-201ENST00000630678 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 DUX4L5-201ENST00000630834 1275 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC068587.7-201ENST00000641602 218 ntBASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV23OR9-2A0A075B6M9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC123595.1-201ENST00000440769 1046 ntBASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 CCDC92B-201ENST00000575506 885 ntBASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV23OR9-2A0A075B6M9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.29■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV23OR9-2A0A075B6M9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRBV23OR9-2A0A075B6M9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.27■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.27■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 LINC02228-203ENST00000641970 1355 ntBASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 KRT18P5-201ENST00000436075 1291 ntBASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 KRT18P14-201ENST00000534205 1250 ntBASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 OXCT2P1-201ENST00000447263 1535 ntBASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 SMUG1P1-201ENST00000590640 811 ntBASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV23OR9-2A0A075B6M9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms