Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AL121994.1-201ENST00000413189 402 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 PTPA-219ENST00000435305 530 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AC008267.3-201ENST00000448776 712 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 RPL3P9-201ENST00000463217 1183 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LY6E-215ENST00000523847 427 ntTSL 3 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 MIR4526-201ENST00000583168 87 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 VENTXP1-201ENST00000569334 2716 ntBASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.68□□□□□ -0.54
NPIPA3F8WFD2 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC106872.9-201ENST00000512437 1393 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 SLC25A6P1-201ENST00000412123 775 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AL078621.2-201ENST00000419351 698 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 OR7E37P-201ENST00000421076 897 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 RN7SL794P-201ENST00000469816 280 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 IGLVI-63-201ENST00000524184 384 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC080023.2-201ENST00000532615 208 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 ABCD1P3-201ENST00000562927 605 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 HNRNPA1P11-201ENST00000580106 956 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC091691.1-201ENST00000583587 1018 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC108673.2-201ENST00000608909 565 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC148476.1-201ENST00000622182 705 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 AC099795.2-201ENST00000639582 440 ntBASIC11.67□□□□□ -0.54
NPIPA3F8WFD2 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms