Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC12.17□□□□□ -0.46
SCN2BO60939 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SCN2BO60939 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 USP3-213ENST00000559711 1693 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SCN2BO60939 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.17□□□□□ -0.46
SCN2BO60939 RPSAP31-201ENST00000416648 895 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 KRT18P4-201ENST00000422599 1288 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 LINC00634-202ENST00000505157 222 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.17□□□□□ -0.46
SCN2BO60939 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC12.17□□□□□ -0.46
SCN2BO60939 C2orf69P1-201ENST00000563532 1093 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 KF455155.1-201ENST00000604493 303 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SCN2BO60939 AC068669.1-201ENST00000623793 2228 ntBASIC12.17□□□□□ -0.46
SCN2BO60939 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC12.17□□□□□ -0.46
SCN2BO60939 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SCN2BO60939 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC12.16□□□□□ -0.46
SCN2BO60939 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.16□□□□□ -0.46
SCN2BO60939 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.16□□□□□ -0.46
SCN2BO60939 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 PHBP10-201ENST00000416467 784 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AC069218.1-201ENST00000435269 762 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 ZNF877P-201ENST00000437614 612 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AL356000.1-201ENST00000441073 1238 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC12.16□□□□□ -0.46
SCN2BO60939 HIST1H2APS2-201ENST00000454426 370 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 LDHBP1-201ENST00000455730 1119 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AC018463.1-201ENST00000456674 917 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.16□□□□□ -0.46
SCN2BO60939 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.16□□□□□ -0.46
SCN2BO60939 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC12.16□□□□□ -0.46
SCN2BO60939 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC12.16□□□□□ -0.46
SCN2BO60939 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.16□□□□□ -0.46
SCN2BO60939 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.16□□□□□ -0.46
SCN2BO60939 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 AC016629.1-201ENST00000596579 586 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AC010976.2-201ENST00000609697 852 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SCN2BO60939 AC005274.1-201ENST00000623460 802 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SCN2BO60939 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 GBP1P1-201ENST00000394662 1740 ntBASIC12.16□□□□□ -0.46
SCN2BO60939 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
SCN2BO60939 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 LINC00923-201ENST00000503768 2036 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SCN2BO60939 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms