Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SLC1A1P43005 SLC25A6P1-201ENST00000412123 775 ntBASIC13.48□□□□□ -0.25
SLC1A1P43005 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC13.48□□□□□ -0.25
SLC1A1P43005 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 RHOQP1-201ENST00000555758 579 ntBASIC13.48□□□□□ -0.25
SLC1A1P43005 NPM1P43-201ENST00000558669 786 ntBASIC13.48□□□□□ -0.25
SLC1A1P43005 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.48□□□□□ -0.25
SLC1A1P43005 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC13.48□□□□□ -0.25
SLC1A1P43005 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SLC1A1P43005 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A1P43005 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 KRT8P46-201ENST00000512037 1426 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
SLC1A1P43005 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 LINC00511-202ENST00000457958 1696 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 USP3-213ENST00000559711 1693 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
SLC1A1P43005 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 LINC01443-202ENST00000584531 1854 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 AC005822.1-201ENST00000414124 1034 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 TEDDM2P-201ENST00000414169 786 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 GAPDHP67-201ENST00000422905 788 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.47□□□□□ -0.25
SLC1A1P43005 AC010677.1-201ENST00000441690 412 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC13.47□□□□□ -0.25
SLC1A1P43005 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.47□□□□□ -0.25
SLC1A1P43005 BPIFB5P-201ENST00000457066 1099 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 PIEZO1P1-201ENST00000485427 219 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 MIR3147-201ENST00000577811 66 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 CYP4F36P-201ENST00000589193 186 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.47□□□□□ -0.25
SLC1A1P43005 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SLC1A1P43005 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 AC087164.2-201ENST00000624514 3130 ntBASIC13.47□□□□□ -0.25
SLC1A1P43005 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SLC1A1P43005 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SLC1A1P43005 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC13.47□□□□□ -0.25
SLC1A1P43005 AC092123.2-201ENST00000611189 5421 ntBASIC13.46□□□□□ -0.25
SLC1A1P43005 KCNMB3-203ENST00000392685 1608 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SLC1A1P43005 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
SLC1A1P43005 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SLC1A1P43005 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms