Protein–RNA interactions for Protein: Q9Y678

COPG1, Coatomer subunit gamma-1, humanhuman

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1Q9Y678 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COPG1Q9Y678 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 AC080038.3-201ENST00000623346 1952 ntBASIC21.51■■□□□ 1.03
COPG1Q9Y678 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.51■■□□□ 1.03
COPG1Q9Y678 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPG1Q9Y678 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COPG1Q9Y678 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.5■■□□□ 1.03
COPG1Q9Y678 AC110285.6-201ENST00000617652 491 ntBASIC21.5■■□□□ 1.03
COPG1Q9Y678 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COPG1Q9Y678 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
COPG1Q9Y678 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COPG1Q9Y678 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPG1Q9Y678 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 AC096631.2-201ENST00000436136 790 ntBASIC21.49■■□□□ 1.03
COPG1Q9Y678 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 AC005837.3-201ENST00000612163 286 ntBASIC21.49■■□□□ 1.03
COPG1Q9Y678 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COPG1Q9Y678 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COPG1Q9Y678 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COPG1Q9Y678 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 AF131216.4-201ENST00000638924 1588 ntBASIC21.48■■□□□ 1.03
COPG1Q9Y678 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
COPG1Q9Y678 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.47■■□□□ 1.03
COPG1Q9Y678 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.47■■□□□ 1.03
COPG1Q9Y678 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COPG1Q9Y678 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COPG1Q9Y678 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPG1Q9Y678 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPG1Q9Y678 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COPG1Q9Y678 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.46■■□□□ 1.03
COPG1Q9Y678 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPG1Q9Y678 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 MIR4466-201ENST00000606121 54 ntBASIC21.45■■□□□ 1.02
COPG1Q9Y678 AC087742.1-201ENST00000575880 1738 ntBASIC21.45■■□□□ 1.02
COPG1Q9Y678 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.45■■□□□ 1.02
COPG1Q9Y678 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPG1Q9Y678 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPG1Q9Y678 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
COPG1Q9Y678 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.45■■□□□ 1.02
COPG1Q9Y678 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.44■■□□□ 1.02
COPG1Q9Y678 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COPG1Q9Y678 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms