Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC34.21■■■■□ 3.07
CDK11AQ9UQ88 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 TESC-206ENST00000541210 936 ntTSL 3 BASIC34.2■■■■□ 3.07
CDK11AQ9UQ88 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC34.2■■■■□ 3.06
CDK11AQ9UQ88 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 AC104771.1-201ENST00000603335 964 ntBASIC34.19■■■■□ 3.06
CDK11AQ9UQ88 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CDK11AQ9UQ88 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CDK11AQ9UQ88 MAP2K4P1-201ENST00000438453 1195 ntBASIC34.18■■■■□ 3.06
CDK11AQ9UQ88 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC34.18■■■■□ 3.06
CDK11AQ9UQ88 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
CDK11AQ9UQ88 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC34.17■■■■□ 3.06
CDK11AQ9UQ88 CROCCP5-201ENST00000436658 830 ntBASIC34.17■■■■□ 3.06
CDK11AQ9UQ88 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC34.17■■■■□ 3.06
CDK11AQ9UQ88 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 AC006970.2-201ENST00000450065 779 ntBASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 AC079140.4-201ENST00000507448 529 ntBASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
CDK11AQ9UQ88 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
CDK11AQ9UQ88 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
CDK11AQ9UQ88 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC34.15■■■■□ 3.06
CDK11AQ9UQ88 USP45-205ENST00000472914 1617 ntTSL 5 BASIC34.15■■■■□ 3.06
CDK11AQ9UQ88 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
CDK11AQ9UQ88 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 AC011767.1-201ENST00000617410 1153 ntBASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
CDK11AQ9UQ88 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC34.12■■■■□ 3.05
CDK11AQ9UQ88 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 ESRRAP2-201ENST00000418437 1549 ntBASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 NCF1B-203ENST00000435988 1254 ntBASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 MDK-213ENST00000617138 635 ntTSL 2 BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.11■■■■□ 3.05
CDK11AQ9UQ88 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 SPI1-203ENST00000533030 661 ntTSL 2 BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 AC004812.2-201ENST00000611079 2094 ntBASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
CDK11AQ9UQ88 LINC01124-201ENST00000409786 2117 ntBASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 AC020928.2-201ENST00000588717 2197 ntBASIC34.09■■■■□ 3.05
CDK11AQ9UQ88 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CDK11AQ9UQ88 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC34.08■■■■□ 3.05
CDK11AQ9UQ88 AL109923.1-201ENST00000618799 583 ntBASIC34.08■■■■□ 3.05
CDK11AQ9UQ88 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC34.08■■■■□ 3.05
CDK11AQ9UQ88 ASL-203ENST00000380839 1765 ntTSL 5 BASIC34.08■■■■□ 3.05
CDK11AQ9UQ88 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
CDK11AQ9UQ88 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC34.07■■■■□ 3.04
CDK11AQ9UQ88 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC34.07■■■■□ 3.04
CDK11AQ9UQ88 AL139125.2-201ENST00000623134 1869 ntBASIC34.06■■■■□ 3.04
CDK11AQ9UQ88 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDK11AQ9UQ88 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
CDK11AQ9UQ88 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC34.06■■■■□ 3.04
CDK11AQ9UQ88 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
CDK11AQ9UQ88 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms