Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPA1Q9UND3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NPIPA1Q9UND3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 LINC01529-204ENST00000636474 1715 ntBASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 MIR572-201ENST00000384983 95 ntBASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 MIR6084-201ENST00000622012 110 ntBASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA1Q9UND3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 AC144652.1-201ENST00000609974 1624 ntBASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 AL031602.1-201ENST00000633169 911 ntBASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA1Q9UND3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.12■□□□□ 0.81
NPIPA1Q9UND3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 OR2I1P-207ENST00000453522 948 ntBASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 AC012414.1-201ENST00000556676 535 ntBASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 AC068473.5-201ENST00000616428 2072 ntBASIC20.11■□□□□ 0.81
NPIPA1Q9UND3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 AC079630.1-202ENST00000618127 1840 ntBASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA1Q9UND3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms