Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.94■■□□□ 1.1
CPSF2Q9P2I0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF2Q9P2I0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
CPSF2Q9P2I0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF2Q9P2I0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CPSF2Q9P2I0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF2Q9P2I0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CPSF2Q9P2I0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 AC080038.3-201ENST00000623346 1952 ntBASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 AC092667.1-201ENST00000434301 2586 ntBASIC21.9■■□□□ 1.1
CPSF2Q9P2I0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CPSF2Q9P2I0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CPSF2Q9P2I0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPSF2Q9P2I0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.89■■□□□ 1.1
CPSF2Q9P2I0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPSF2Q9P2I0 AC139530.1-201ENST00000575312 1977 ntBASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 BX664725.1-201ENST00000438252 379 ntBASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF2Q9P2I0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF2Q9P2I0 AC021242.3-201ENST00000607598 1377 ntBASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 AC005703.6-201ENST00000623265 1329 ntBASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 AC087742.1-201ENST00000575880 1738 ntBASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms