Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 AC133041.1-202ENST00000642053 222 ntBASIC28.14■■■□□ 2.1
TFCP2L1Q9NZI6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TFCP2L1Q9NZI6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
TFCP2L1Q9NZI6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TFCP2L1Q9NZI6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
TFCP2L1Q9NZI6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 AC104187.1-201ENST00000607510 612 ntBASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 AC068587.7-201ENST00000641602 218 ntBASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TFCP2L1Q9NZI6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 POU5F1P3-201ENST00000428824 1078 ntBASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TFCP2L1Q9NZI6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 AC073210.2-201ENST00000430369 194 ntBASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.08■■■□□ 2.09
TFCP2L1Q9NZI6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 KRT18P29-201ENST00000397031 1267 ntBASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 UBE2DNL-204ENST00000602536 740 ntBASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 ITM2C-210ENST00000620962 501 ntBASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 AC135731.1-201ENST00000569415 2548 ntBASIC28.07■■■□□ 2.08
TFCP2L1Q9NZI6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
TFCP2L1Q9NZI6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TFCP2L1Q9NZI6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
TFCP2L1Q9NZI6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
TFCP2L1Q9NZI6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TFCP2L1Q9NZI6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 AC010141.3-201ENST00000456659 717 ntBASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 AF201337.1-201ENST00000520239 748 ntBASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 AC098934.4-201ENST00000564127 592 ntBASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.05■■■□□ 2.08
TFCP2L1Q9NZI6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TFCP2L1Q9NZI6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TFCP2L1Q9NZI6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.04■■■□□ 2.08
TFCP2L1Q9NZI6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.04■■■□□ 2.08
TFCP2L1Q9NZI6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
TFCP2L1Q9NZI6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
TFCP2L1Q9NZI6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms