Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CUEDC1Q9NWM3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CUEDC1Q9NWM3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.17■□□□□ 0.98
CUEDC1Q9NWM3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 EDA-201ENST00000338901 1233 ntBASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CUEDC1Q9NWM3 LINC01960-201ENST00000563759 1884 ntBASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 AL031432.3-201ENST00000607698 485 ntBASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CUEDC1Q9NWM3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CUEDC1Q9NWM3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
CUEDC1Q9NWM3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 AL355001.2-201ENST00000620617 1191 ntBASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CUEDC1Q9NWM3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CUEDC1Q9NWM3 AC087742.1-201ENST00000575880 1738 ntBASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 AP001330.3-201ENST00000520123 633 ntBASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 AC008764.7-201ENST00000593779 1081 ntBASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.12■□□□□ 0.97
CUEDC1Q9NWM3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 BX842568.3-201ENST00000418104 571 ntBASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 AF213884.3-201ENST00000563833 479 ntBASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 MIR6821-201ENST00000617625 74 ntBASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 AL031602.1-201ENST00000633169 911 ntBASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CUEDC1Q9NWM3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CUEDC1Q9NWM3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms