Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Q9N2K0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.33■□□□□ 0.53
Q9N2K0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Q9N2K0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.33■□□□□ 0.52
Q9N2K0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.33■□□□□ 0.52
Q9N2K0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Q9N2K0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Q9N2K0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q9N2K0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Q9N2K0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Q9N2K0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.32■□□□□ 0.52
Q9N2K0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.32■□□□□ 0.52
Q9N2K0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.32■□□□□ 0.52
Q9N2K0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Q9N2K0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q9N2K0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Q9N2K0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.32■□□□□ 0.52
Q9N2K0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q9N2K0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q9N2K0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
Q9N2K0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.31■□□□□ 0.52
Q9N2K0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Q9N2K0 KRT125P-201ENST00000546827 989 ntBASIC18.31■□□□□ 0.52
Q9N2K0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.31■□□□□ 0.52
Q9N2K0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q9N2K0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.31■□□□□ 0.52
Q9N2K0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.31■□□□□ 0.52
Q9N2K0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Q9N2K0 AC004687.1-201ENST00000579003 1625 ntBASIC18.31■□□□□ 0.52
Q9N2K0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Q9N2K0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9N2K0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 Z92544.1-202ENST00000571933 1220 ntBASIC18.3■□□□□ 0.52
Q9N2K0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9N2K0 MTDHP2-201ENST00000601468 714 ntBASIC18.3■□□□□ 0.52
Q9N2K0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Q9N2K0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Q9N2K0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9N2K0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Q9N2K0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.3■□□□□ 0.52
Q9N2K0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Q9N2K0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Q9N2K0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Q9N2K0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.29■□□□□ 0.52
Q9N2K0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.29■□□□□ 0.52
Q9N2K0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.29■□□□□ 0.52
Q9N2K0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Q9N2K0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.28■□□□□ 0.52
Q9N2K0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
Q9N2K0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Q9N2K0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Q9N2K0 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.28■□□□□ 0.52
Q9N2K0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Q9N2K0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
Q9N2K0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.27■□□□□ 0.52
Q9N2K0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9N2K0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9N2K0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Q9N2K0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Q9N2K0 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.27■□□□□ 0.52
Q9N2K0 CA15P2-201ENST00000611168 834 ntBASIC18.27■□□□□ 0.52
Q9N2K0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q9N2K0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Q9N2K0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.27■□□□□ 0.51
Q9N2K0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.27■□□□□ 0.51
Q9N2K0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Q9N2K0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms