Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 AC079630.1-202ENST00000618127 1840 ntBASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SND1-IT1Q9HBX3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 AC026310.3-201ENST00000625186 2373 ntBASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SND1-IT1Q9HBX3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SND1-IT1Q9HBX3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 AC080038.3-201ENST00000623346 1952 ntBASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SND1-IT1Q9HBX3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SND1-IT1Q9HBX3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SND1-IT1Q9HBX3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SND1-IT1Q9HBX3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SND1-IT1Q9HBX3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms