Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 RN7SL440P-201ENST00000577855 343 ntBASIC23.98■■□□□ 1.43
RNF39Q9H2S5 AC060766.1-201ENST00000590824 627 ntBASIC23.98■■□□□ 1.43
RNF39Q9H2S5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF39Q9H2S5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF39Q9H2S5 AC104564.3-201ENST00000582367 638 ntBASIC23.97■■□□□ 1.43
RNF39Q9H2S5 AL358852.1-201ENST00000623174 1268 ntBASIC23.97■■□□□ 1.43
RNF39Q9H2S5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 YBX1P1-201ENST00000445822 960 ntBASIC23.96■■□□□ 1.43
RNF39Q9H2S5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 AC012414.1-201ENST00000556676 535 ntBASIC23.96■■□□□ 1.43
RNF39Q9H2S5 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.96■■□□□ 1.43
RNF39Q9H2S5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.43
RNF39Q9H2S5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 AC105148.1-201ENST00000604961 409 ntBASIC23.95■■□□□ 1.42
RNF39Q9H2S5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF39Q9H2S5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 ANOS2P-203ENST00000472227 1816 ntBASIC23.94■■□□□ 1.42
RNF39Q9H2S5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF39Q9H2S5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 AC027612.3-201ENST00000413684 1047 ntBASIC23.93■■□□□ 1.42
RNF39Q9H2S5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF39Q9H2S5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 AL354811.1-201ENST00000610286 706 ntBASIC23.92■■□□□ 1.42
RNF39Q9H2S5 RN7SL832P-201ENST00000607781 1756 ntBASIC23.92■■□□□ 1.42
RNF39Q9H2S5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.92■■□□□ 1.42
RNF39Q9H2S5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L2-201ENST00000561772 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 AL512356.3-201ENST00000623005 461 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L6-201ENST00000626483 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L1-201ENST00000627662 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L8-201ENST00000629013 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L3-201ENST00000630187 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L7-201ENST00000630678 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 DUX4L5-201ENST00000630834 1275 ntBASIC23.91■■□□□ 1.42
RNF39Q9H2S5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF39Q9H2S5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF39Q9H2S5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms