Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.84■■□□□ 1.41
CDT1Q9H211 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.84■■□□□ 1.41
CDT1Q9H211 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.84■■□□□ 1.41
CDT1Q9H211 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.84■■□□□ 1.41
CDT1Q9H211 MIR6084-201ENST00000622012 110 ntBASIC23.84■■□□□ 1.41
CDT1Q9H211 AC087239.1-201ENST00000622671 572 ntBASIC23.84■■□□□ 1.41
CDT1Q9H211 AL358852.1-201ENST00000623174 1268 ntBASIC23.84■■□□□ 1.41
CDT1Q9H211 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.84■■□□□ 1.41
CDT1Q9H211 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDT1Q9H211 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CDT1Q9H211 LINC01960-201ENST00000563759 1884 ntBASIC23.83■■□□□ 1.41
CDT1Q9H211 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDT1Q9H211 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.83■■□□□ 1.41
CDT1Q9H211 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDT1Q9H211 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDT1Q9H211 MIR6821-201ENST00000617625 74 ntBASIC23.83■■□□□ 1.41
CDT1Q9H211 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.83■■□□□ 1.41
CDT1Q9H211 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDT1Q9H211 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CDT1Q9H211 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDT1Q9H211 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDT1Q9H211 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.83■■□□□ 1.4
CDT1Q9H211 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDT1Q9H211 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CDT1Q9H211 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDT1Q9H211 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDT1Q9H211 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDT1Q9H211 AC097381.1-201ENST00000429019 1296 ntBASIC23.82■■□□□ 1.4
CDT1Q9H211 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.82■■□□□ 1.4
CDT1Q9H211 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CDT1Q9H211 AL354811.1-201ENST00000610286 706 ntBASIC23.82■■□□□ 1.4
CDT1Q9H211 AC105233.4-201ENST00000642045 216 ntBASIC23.82■■□□□ 1.4
CDT1Q9H211 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDT1Q9H211 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDT1Q9H211 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.82■■□□□ 1.4
CDT1Q9H211 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDT1Q9H211 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDT1Q9H211 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.81■■□□□ 1.4
CDT1Q9H211 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDT1Q9H211 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.81■■□□□ 1.4
CDT1Q9H211 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.81■■□□□ 1.4
CDT1Q9H211 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDT1Q9H211 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 AC027612.3-201ENST00000413684 1047 ntBASIC23.8■■□□□ 1.4
CDT1Q9H211 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDT1Q9H211 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CDT1Q9H211 OXCT2P1-201ENST00000447263 1535 ntBASIC23.79■■□□□ 1.4
CDT1Q9H211 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDT1Q9H211 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDT1Q9H211 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDT1Q9H211 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDT1Q9H211 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.79■■□□□ 1.4
CDT1Q9H211 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.79■■□□□ 1.4
CDT1Q9H211 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.79■■□□□ 1.4
CDT1Q9H211 AC087623.3-201ENST00000607047 1098 ntBASIC23.79■■□□□ 1.4
CDT1Q9H211 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.79■■□□□ 1.4
CDT1Q9H211 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDT1Q9H211 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDT1Q9H211 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDT1Q9H211 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.78■■□□□ 1.4
CDT1Q9H211 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.78■■□□□ 1.4
CDT1Q9H211 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.78■■□□□ 1.4
CDT1Q9H211 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.78■■□□□ 1.4
CDT1Q9H211 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDT1Q9H211 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.78■■□□□ 1.4
CDT1Q9H211 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDT1Q9H211 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDT1Q9H211 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.78■■□□□ 1.4
CDT1Q9H211 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDT1Q9H211 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDT1Q9H211 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDT1Q9H211 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDT1Q9H211 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CDT1Q9H211 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 YBX1P1-201ENST00000445822 960 ntBASIC23.77■■□□□ 1.4
CDT1Q9H211 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CDT1Q9H211 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CDT1Q9H211 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDT1Q9H211 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms