Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC009102.2-201ENST00000606772 1639 ntBASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHANK2-AS3Q9BTD1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 KRT125P-201ENST00000546827 989 ntBASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC004687.1-201ENST00000579003 1625 ntBASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHANK2-AS3Q9BTD1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 MTDHP2-201ENST00000601468 714 ntBASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHANK2-AS3Q9BTD1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 Z92544.1-202ENST00000571933 1220 ntBASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 CA15P2-201ENST00000611168 834 ntBASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
SHANK2-AS3Q9BTD1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SHANK2-AS3Q9BTD1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 C17orf82-201ENST00000623772 1530 ntBASIC16.8■□□□□ 0.28
SHANK2-AS3Q9BTD1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SHANK2-AS3Q9BTD1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms