Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.61■□□□□ 0.41
RITA1Q96K30 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.61■□□□□ 0.41
RITA1Q96K30 AC127496.7-201ENST00000625110 1798 ntBASIC17.61■□□□□ 0.41
RITA1Q96K30 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.61■□□□□ 0.41
RITA1Q96K30 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.61■□□□□ 0.41
RITA1Q96K30 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.61■□□□□ 0.41
RITA1Q96K30 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RITA1Q96K30 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RITA1Q96K30 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RITA1Q96K30 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RITA1Q96K30 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RITA1Q96K30 UNC93B3-201ENST00000308076 687 ntBASIC17.6■□□□□ 0.41
RITA1Q96K30 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 DUX4L19-201ENST00000557448 1267 ntBASIC17.6■□□□□ 0.41
RITA1Q96K30 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.6■□□□□ 0.41
RITA1Q96K30 AC010525.1-201ENST00000585559 441 ntBASIC17.6■□□□□ 0.41
RITA1Q96K30 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.6■□□□□ 0.41
RITA1Q96K30 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RITA1Q96K30 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.6■□□□□ 0.41
RITA1Q96K30 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.6■□□□□ 0.41
RITA1Q96K30 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RITA1Q96K30 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.59■□□□□ 0.41
RITA1Q96K30 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.59■□□□□ 0.41
RITA1Q96K30 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.59■□□□□ 0.41
RITA1Q96K30 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RITA1Q96K30 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RITA1Q96K30 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.59■□□□□ 0.41
RITA1Q96K30 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RITA1Q96K30 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.59■□□□□ 0.41
RITA1Q96K30 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RITA1Q96K30 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RITA1Q96K30 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RITA1Q96K30 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RITA1Q96K30 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RITA1Q96K30 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RITA1Q96K30 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
RITA1Q96K30 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.58■□□□□ 0.4
RITA1Q96K30 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.58■□□□□ 0.4
RITA1Q96K30 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
RITA1Q96K30 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RITA1Q96K30 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RITA1Q96K30 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RITA1Q96K30 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RITA1Q96K30 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RITA1Q96K30 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.57■□□□□ 0.4
RITA1Q96K30 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RITA1Q96K30 AC137767.1-201ENST00000602918 1920 ntBASIC17.57■□□□□ 0.4
RITA1Q96K30 AC079834.2-201ENST00000609776 1949 ntBASIC17.57■□□□□ 0.4
RITA1Q96K30 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RITA1Q96K30 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.57■□□□□ 0.4
RITA1Q96K30 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.57■□□□□ 0.4
RITA1Q96K30 AL138724.1-201ENST00000606771 1088 ntBASIC17.57■□□□□ 0.4
RITA1Q96K30 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RITA1Q96K30 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 ECEL1P1-201ENST00000373592 1742 ntBASIC17.57■□□□□ 0.4
RITA1Q96K30 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RITA1Q96K30 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RITA1Q96K30 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 AC139530.1-201ENST00000575312 1977 ntBASIC17.57■□□□□ 0.4
RITA1Q96K30 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RITA1Q96K30 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RITA1Q96K30 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RITA1Q96K30 LINC00526-201ENST00000581067 1875 ntBASIC17.56■□□□□ 0.4
RITA1Q96K30 AC242852.2-201ENST00000615738 1807 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms