Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDLIM5Q96HC4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 DUX4L19-201ENST00000557448 1267 ntBASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 AL138724.1-201ENST00000606771 1088 ntBASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDLIM5Q96HC4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PDLIM5Q96HC4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PDLIM5Q96HC4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 OR2I1P-207ENST00000453522 948 ntBASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDLIM5Q96HC4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 AC131281.2-201ENST00000520478 145 ntBASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDLIM5Q96HC4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 AC068587.7-201ENST00000641602 218 ntBASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 C11orf96-202ENST00000528572 1834 ntBASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDLIM5Q96HC4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 LINC00565-201ENST00000562710 2331 ntBASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.42■■□□□ 1.02
PDLIM5Q96HC4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
PDLIM5Q96HC4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms